public class BioPAXIndexRepository extends BioPAXRepository
Constructor and Description |
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BioPAXIndexRepository() |
Modifier and Type | Method and Description |
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void |
addToReport(java.lang.String newMess) |
void |
clearReport() |
AccessionNumberTable |
getAccessionNumberTable() |
java.lang.String |
getAccNumberFileName() |
BioPAXGraphQueryEngine |
getBioPAXGraphQueryEngine() |
java.lang.String |
getDatabaseFileName() |
static BioPAXIndexRepository |
getInstance() |
java.lang.String |
getReport() |
void |
setAccessionNumberTable(AccessionNumberTable acctable) |
void |
setAccNumberFileName(java.lang.String dbfn) |
void |
setBioPAXGraphQueryEngine(BioPAXGraphQueryEngine beng) |
void |
setDatabaseFileName(java.lang.String dbfn) |
void |
setReport(java.lang.String s) |
public void setAccessionNumberTable(AccessionNumberTable acctable)
public AccessionNumberTable getAccessionNumberTable()
public void setBioPAXGraphQueryEngine(BioPAXGraphQueryEngine beng)
public BioPAXGraphQueryEngine getBioPAXGraphQueryEngine()
public static BioPAXIndexRepository getInstance()
public void setDatabaseFileName(java.lang.String dbfn)
public java.lang.String getDatabaseFileName()
public void setAccNumberFileName(java.lang.String dbfn)
public java.lang.String getAccNumberFileName()
public void addToReport(java.lang.String newMess)
public void clearReport()
public java.lang.String getReport()
public void setReport(java.lang.String s)