public interface PathwayStep extends UtilityClass
(URI: http://www.biopax.org/release/biopax-level3.owl#PathwayStep)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
evidenceProperty
The Jena Property for evidence
|
static com.hp.hpl.jena.rdf.model.Property |
nextStepProperty
The Jena Property for nextStep
|
static com.hp.hpl.jena.rdf.model.Property |
stepProcessProperty
The Jena Property for stepProcess
|
static Resource |
TYPE
The rdf:type for this ontology class
|
commentProperty
Modifier and Type | Method and Description |
---|---|
Evidence |
addEvidence()
Adds an anonymous value for the 'evidence' property
|
Evidence |
addEvidence(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'evidence' property.
|
void |
addEvidence(Evidence evidence)
Adds a value for the 'evidence' property
|
PathwayStep |
addNextStep()
Adds an anonymous value for the 'nextStep' property
|
PathwayStep |
addNextStep(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'nextStep' property.
|
void |
addNextStep(PathwayStep nextStep)
Adds a value for the 'nextStep' property
|
Interaction |
addStepProcess_asInteraction()
Adds an anonymous value for the 'stepProcess' property
|
Interaction |
addStepProcess_asInteraction(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'stepProcess' property.
|
Pathway |
addStepProcess_asPathway()
Adds an anonymous value for the 'stepProcess' property
|
Pathway |
addStepProcess_asPathway(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'stepProcess' property.
|
void |
addStepProcess(Interaction stepProcess)
Adds a value for the 'stepProcess' property
|
void |
addStepProcess(Pathway stepProcess)
Adds a value for the 'stepProcess' property
|
java.util.Iterator |
getEvidence()
Get an Iterator the 'evidence' property values.
|
java.util.Iterator |
getNextStep()
Get an Iterator the 'nextStep' property values.
|
java.util.Iterator |
getStepProcess_asInteraction()
Get an Iterator the 'stepProcess' property values.
|
java.util.Iterator |
getStepProcess_asPathway()
Get an Iterator the 'stepProcess' property values.
|
void |
removeEvidence(Evidence evidence)
Removes a value for the 'evidence' property.
|
void |
removeNextStep(PathwayStep nextStep)
Removes a value for the 'nextStep' property.
|
void |
removeStepProcess(Interaction stepProcess)
Removes a value for the 'stepProcess' property.
|
void |
removeStepProcess(Pathway stepProcess)
Removes a value for the 'stepProcess' property.
|
addComment, getComment, removeComment
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property nextStepProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#nextStep)
static final com.hp.hpl.jena.rdf.model.Property stepProcessProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#stepProcess)
static final com.hp.hpl.jena.rdf.model.Property evidenceProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#evidence)
java.util.Iterator getNextStep() throws com.ibm.adtech.jastor.JastorException
Iterator
of PathwayStep
com.ibm.adtech.jastor.JastorException
nextStepProperty
void addNextStep(PathwayStep nextStep) throws com.ibm.adtech.jastor.JastorException
The
- PathwayStep
to addcom.ibm.adtech.jastor.JastorException
nextStepProperty
PathwayStep addNextStep() throws com.ibm.adtech.jastor.JastorException
PathwayStep
createdcom.ibm.adtech.jastor.JastorException
nextStepProperty
PathwayStep addNextStep(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
PathwayStep
with the factory
and calling addNextStep(fr.curie.BiNoM.pathways.biopax.PathwayStep nextStep)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#PathwayStep. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
nextStepProperty
void removeNextStep(PathwayStep nextStep) throws com.ibm.adtech.jastor.JastorException
The
- PathwayStep
to removecom.ibm.adtech.jastor.JastorException
nextStepProperty
java.util.Iterator getStepProcess_asInteraction() throws com.ibm.adtech.jastor.JastorException
Iterator
of Interaction
com.ibm.adtech.jastor.JastorException
stepProcessProperty
void addStepProcess(Interaction stepProcess) throws com.ibm.adtech.jastor.JastorException
The
- Interaction
to addcom.ibm.adtech.jastor.JastorException
stepProcessProperty
Interaction addStepProcess_asInteraction() throws com.ibm.adtech.jastor.JastorException
Interaction
createdcom.ibm.adtech.jastor.JastorException
stepProcessProperty
Interaction addStepProcess_asInteraction(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Interaction
with the factory
and calling addStepProcess(fr.curie.BiNoM.pathways.biopax.Interaction stepProcess)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Interaction. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
stepProcessProperty
void removeStepProcess(Interaction stepProcess) throws com.ibm.adtech.jastor.JastorException
The
- Interaction
to removecom.ibm.adtech.jastor.JastorException
stepProcessProperty
java.util.Iterator getStepProcess_asPathway() throws com.ibm.adtech.jastor.JastorException
Iterator
of Pathway
com.ibm.adtech.jastor.JastorException
stepProcessProperty
void addStepProcess(Pathway stepProcess) throws com.ibm.adtech.jastor.JastorException
The
- Pathway
to addcom.ibm.adtech.jastor.JastorException
stepProcessProperty
Pathway addStepProcess_asPathway() throws com.ibm.adtech.jastor.JastorException
Pathway
createdcom.ibm.adtech.jastor.JastorException
stepProcessProperty
Pathway addStepProcess_asPathway(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Pathway
with the factory
and calling addStepProcess(fr.curie.BiNoM.pathways.biopax.Pathway stepProcess)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Pathway. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
stepProcessProperty
void removeStepProcess(Pathway stepProcess) throws com.ibm.adtech.jastor.JastorException
The
- Pathway
to removecom.ibm.adtech.jastor.JastorException
stepProcessProperty
java.util.Iterator getEvidence() throws com.ibm.adtech.jastor.JastorException
Iterator
of Evidence
com.ibm.adtech.jastor.JastorException
evidenceProperty
void addEvidence(Evidence evidence) throws com.ibm.adtech.jastor.JastorException
The
- Evidence
to addcom.ibm.adtech.jastor.JastorException
evidenceProperty
Evidence addEvidence() throws com.ibm.adtech.jastor.JastorException
Evidence
createdcom.ibm.adtech.jastor.JastorException
evidenceProperty
Evidence addEvidence(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Evidence
with the factory
and calling addEvidence(fr.curie.BiNoM.pathways.biopax.Evidence evidence)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Evidence. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
evidenceProperty
void removeEvidence(Evidence evidence) throws com.ibm.adtech.jastor.JastorException
The
- Evidence
to removecom.ibm.adtech.jastor.JastorException
evidenceProperty