public interface EntityReference extends UtilityClass
(URI: http://www.biopax.org/release/biopax-level3.owl#EntityReference)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
entityFeatureProperty
The Jena Property for entityFeature
|
static com.hp.hpl.jena.rdf.model.Property |
entityReferenceTypeProperty
The Jena Property for entityReferenceType
|
static com.hp.hpl.jena.rdf.model.Property |
evidenceProperty
The Jena Property for evidence
|
static com.hp.hpl.jena.rdf.model.Property |
memberEntityReferenceProperty
The Jena Property for memberEntityReference
|
static com.hp.hpl.jena.rdf.model.Property |
nameProperty
The Jena Property for name
|
static Resource |
TYPE
The rdf:type for this ontology class
|
static com.hp.hpl.jena.rdf.model.Property |
xrefProperty
The Jena Property for xref
|
commentProperty
Modifier and Type | Method and Description |
---|---|
EntityFeature |
addEntityFeature()
Adds an anonymous value for the 'entityFeature' property
|
EntityFeature |
addEntityFeature(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'entityFeature' property.
|
void |
addEntityFeature(EntityFeature entityFeature)
Adds a value for the 'entityFeature' property
|
Evidence |
addEvidence()
Adds an anonymous value for the 'evidence' property
|
Evidence |
addEvidence(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'evidence' property.
|
void |
addEvidence(Evidence evidence)
Adds a value for the 'evidence' property
|
EntityReference |
addMemberEntityReference()
Adds an anonymous value for the 'memberEntityReference' property
|
EntityReference |
addMemberEntityReference(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'memberEntityReference' property.
|
void |
addMemberEntityReference(EntityReference memberEntityReference)
Adds a value for the 'memberEntityReference' property
|
void |
addName(java.lang.String name)
Add a 'name' property value
|
Xref |
addXref()
Adds an anonymous value for the 'xref' property
|
Xref |
addXref(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'xref' property.
|
void |
addXref(Xref xref)
Adds a value for the 'xref' property
|
java.util.Iterator |
getEntityFeature()
Get an Iterator the 'entityFeature' property values.
|
EntityReferenceTypeVocabulary |
getEntityReferenceType()
Gets the 'entityReferenceType' property value
|
java.util.Iterator |
getEvidence()
Get an Iterator the 'evidence' property values.
|
java.util.Iterator |
getMemberEntityReference()
Get an Iterator the 'memberEntityReference' property values.
|
java.util.Iterator |
getName()
Iterates through the 'name' property values.
|
java.util.Iterator |
getXref()
Get an Iterator the 'xref' property values.
|
void |
removeEntityFeature(EntityFeature entityFeature)
Removes a value for the 'entityFeature' property.
|
void |
removeEvidence(Evidence evidence)
Removes a value for the 'evidence' property.
|
void |
removeMemberEntityReference(EntityReference memberEntityReference)
Removes a value for the 'memberEntityReference' property.
|
void |
removeName(java.lang.String name)
Remove a 'name' property value.
|
void |
removeXref(Xref xref)
Removes a value for the 'xref' property.
|
EntityReferenceTypeVocabulary |
setEntityReferenceType()
Sets the 'entityReferenceType' property value to an anonymous node
|
EntityReferenceTypeVocabulary |
setEntityReferenceType(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'entityReferenceType' property value to the given resource, and add's rdf:type properties.
|
void |
setEntityReferenceType(EntityReferenceTypeVocabulary entityReferenceType)
Sets the 'entityReferenceType' property value
|
addComment, getComment, removeComment
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property memberEntityReferenceProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#memberEntityReference)
static final com.hp.hpl.jena.rdf.model.Property entityReferenceTypeProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#entityReferenceType)
static final com.hp.hpl.jena.rdf.model.Property entityFeatureProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#entityFeature)
static final com.hp.hpl.jena.rdf.model.Property nameProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#name)
static final com.hp.hpl.jena.rdf.model.Property evidenceProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#evidence)
static final com.hp.hpl.jena.rdf.model.Property xrefProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#xref)
java.util.Iterator getMemberEntityReference() throws com.ibm.adtech.jastor.JastorException
Iterator
of EntityReference
com.ibm.adtech.jastor.JastorException
memberEntityReferenceProperty
void addMemberEntityReference(EntityReference memberEntityReference) throws com.ibm.adtech.jastor.JastorException
The
- EntityReference
to addcom.ibm.adtech.jastor.JastorException
memberEntityReferenceProperty
EntityReference addMemberEntityReference() throws com.ibm.adtech.jastor.JastorException
EntityReference
createdcom.ibm.adtech.jastor.JastorException
memberEntityReferenceProperty
EntityReference addMemberEntityReference(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
EntityReference
with the factory
and calling addMemberEntityReference(fr.curie.BiNoM.pathways.biopax.EntityReference memberEntityReference)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#EntityReference. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
memberEntityReferenceProperty
void removeMemberEntityReference(EntityReference memberEntityReference) throws com.ibm.adtech.jastor.JastorException
The
- EntityReference
to removecom.ibm.adtech.jastor.JastorException
memberEntityReferenceProperty
EntityReferenceTypeVocabulary getEntityReferenceType() throws com.ibm.adtech.jastor.JastorException
EntityReferenceTypeVocabulary
com.ibm.adtech.jastor.JastorException
entityReferenceTypeProperty
void setEntityReferenceType(EntityReferenceTypeVocabulary entityReferenceType) throws com.ibm.adtech.jastor.JastorException
{@link
- fr.curie.BiNoM.pathways.biopax.EntityReferenceTypeVocabulary}com.ibm.adtech.jastor.JastorException
entityReferenceTypeProperty
EntityReferenceTypeVocabulary setEntityReferenceType() throws com.ibm.adtech.jastor.JastorException
EntityReferenceTypeVocabulary
, the created valuecom.ibm.adtech.jastor.JastorException
entityReferenceTypeProperty
EntityReferenceTypeVocabulary setEntityReferenceType(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
EntityReferenceTypeVocabulary
with the factory.
and calling setEntityReferenceType(fr.curie.BiNoM.pathways.biopax.EntityReferenceTypeVocabulary entityReferenceType)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#EntityReferenceTypeVocabulary. That is, this method
should not be used as a shortcut for creating new objects in the model.{@link
- com.hp.hpl.jena.rdf.model.Resource} must not be be null.EntityReferenceTypeVocabulary
, the newly created valuecom.ibm.adtech.jastor.JastorException
entityReferenceTypeProperty
java.util.Iterator getEntityFeature() throws com.ibm.adtech.jastor.JastorException
Iterator
of EntityFeature
com.ibm.adtech.jastor.JastorException
entityFeatureProperty
void addEntityFeature(EntityFeature entityFeature) throws com.ibm.adtech.jastor.JastorException
The
- EntityFeature
to addcom.ibm.adtech.jastor.JastorException
entityFeatureProperty
EntityFeature addEntityFeature() throws com.ibm.adtech.jastor.JastorException
EntityFeature
createdcom.ibm.adtech.jastor.JastorException
entityFeatureProperty
EntityFeature addEntityFeature(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
EntityFeature
with the factory
and calling addEntityFeature(fr.curie.BiNoM.pathways.biopax.EntityFeature entityFeature)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#EntityFeature. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
entityFeatureProperty
void removeEntityFeature(EntityFeature entityFeature) throws com.ibm.adtech.jastor.JastorException
The
- EntityFeature
to removecom.ibm.adtech.jastor.JastorException
entityFeatureProperty
java.util.Iterator getName() throws com.ibm.adtech.jastor.JastorException
Iterator
of String
com.ibm.adtech.jastor.JastorException
nameProperty
void addName(java.lang.String name) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to addcom.ibm.adtech.jastor.JastorException
nameProperty
void removeName(java.lang.String name) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to removecom.ibm.adtech.jastor.JastorException
nameProperty
java.util.Iterator getEvidence() throws com.ibm.adtech.jastor.JastorException
Iterator
of Evidence
com.ibm.adtech.jastor.JastorException
evidenceProperty
void addEvidence(Evidence evidence) throws com.ibm.adtech.jastor.JastorException
The
- Evidence
to addcom.ibm.adtech.jastor.JastorException
evidenceProperty
Evidence addEvidence() throws com.ibm.adtech.jastor.JastorException
Evidence
createdcom.ibm.adtech.jastor.JastorException
evidenceProperty
Evidence addEvidence(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Evidence
with the factory
and calling addEvidence(fr.curie.BiNoM.pathways.biopax.Evidence evidence)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Evidence. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
evidenceProperty
void removeEvidence(Evidence evidence) throws com.ibm.adtech.jastor.JastorException
The
- Evidence
to removecom.ibm.adtech.jastor.JastorException
evidenceProperty
java.util.Iterator getXref() throws com.ibm.adtech.jastor.JastorException
Iterator
of Xref
com.ibm.adtech.jastor.JastorException
xrefProperty
void addXref(Xref xref) throws com.ibm.adtech.jastor.JastorException
The
- Xref
to addcom.ibm.adtech.jastor.JastorException
xrefProperty
Xref addXref() throws com.ibm.adtech.jastor.JastorException
Xref
createdcom.ibm.adtech.jastor.JastorException
xrefProperty
Xref addXref(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Xref
with the factory
and calling addXref(fr.curie.BiNoM.pathways.biopax.Xref xref)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Xref. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
xrefProperty
void removeXref(Xref xref) throws com.ibm.adtech.jastor.JastorException
The
- Xref
to removecom.ibm.adtech.jastor.JastorException
xrefProperty