public class PhysicalEntityImpl extends com.ibm.adtech.jastor.ThingImpl implements PhysicalEntity
PhysicalEntity
Use the fr.curie.BiNoM.pathways.biopax.biopax_DASH_level3_DOT_owlFactory to create instances of this class.
(URI: http://www.biopax.org/release/biopax-level3.owl#PhysicalEntity)
TYPE
Modifier and Type | Method and Description |
---|---|
void |
addAvailability(java.lang.String availability)
Add a 'availability' property value
|
void |
addComment(java.lang.String comment)
Add a 'comment' property value
|
Provenance |
addDataSource()
Adds an anonymous value for the 'dataSource' property
|
Provenance |
addDataSource(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'dataSource' property
|
void |
addDataSource(Provenance dataSource)
Adds a value for the 'dataSource' property
|
void |
addedStatement(com.hp.hpl.jena.rdf.model.Statement stmt) |
Evidence |
addEvidence()
Adds an anonymous value for the 'evidence' property
|
Evidence |
addEvidence(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'evidence' property
|
void |
addEvidence(Evidence evidence)
Adds a value for the 'evidence' property
|
EntityFeature |
addFeature()
Adds an anonymous value for the 'feature' property
|
EntityFeature |
addFeature(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'feature' property
|
void |
addFeature(EntityFeature feature)
Adds a value for the 'feature' property
|
PhysicalEntity |
addMemberPhysicalEntity()
Adds an anonymous value for the 'memberPhysicalEntity' property
|
PhysicalEntity |
addMemberPhysicalEntity(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'memberPhysicalEntity' property
|
void |
addMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity)
Adds a value for the 'memberPhysicalEntity' property
|
void |
addName(java.lang.String name)
Add a 'name' property value
|
EntityFeature |
addNotFeature()
Adds an anonymous value for the 'notFeature' property
|
EntityFeature |
addNotFeature(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'notFeature' property
|
void |
addNotFeature(EntityFeature notFeature)
Adds a value for the 'notFeature' property
|
Xref |
addXref()
Adds an anonymous value for the 'xref' property
|
Xref |
addXref(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'xref' property
|
void |
addXref(Xref xref)
Adds a value for the 'xref' property
|
void |
clearCache() |
java.util.Iterator |
getAvailability()
Iterates through the 'availability' property values.
|
CellularLocationVocabulary |
getCellularLocation()
Gets the 'cellularLocation' property value
|
java.util.Iterator |
getComment()
Iterates through the 'comment' property values.
|
java.util.Iterator |
getDataSource()
Get an Iterator the 'dataSource' property values.
|
java.util.Iterator |
getEvidence()
Get an Iterator the 'evidence' property values.
|
java.util.Iterator |
getFeature()
Get an Iterator the 'feature' property values.
|
java.util.Iterator |
getMemberPhysicalEntity()
Get an Iterator the 'memberPhysicalEntity' property values.
|
java.util.Iterator |
getName()
Iterates through the 'name' property values.
|
java.util.Iterator |
getNotFeature()
Get an Iterator the 'notFeature' property values.
|
java.util.Iterator |
getXref()
Get an Iterator the 'xref' property values.
|
java.util.List |
listStatements() |
void |
registerListener(ThingListener listener) |
void |
removeAvailability(java.lang.String availability)
Remove a 'availability' property value.
|
void |
removeComment(java.lang.String comment)
Remove a 'comment' property value.
|
void |
removeDataSource(Provenance dataSource)
Removes a value for the 'dataSource' property.
|
void |
removedStatement(com.hp.hpl.jena.rdf.model.Statement stmt) |
void |
removeEvidence(Evidence evidence)
Removes a value for the 'evidence' property.
|
void |
removeFeature(EntityFeature feature)
Removes a value for the 'feature' property.
|
void |
removeMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity)
Removes a value for the 'memberPhysicalEntity' property.
|
void |
removeName(java.lang.String name)
Remove a 'name' property value.
|
void |
removeNotFeature(EntityFeature notFeature)
Removes a value for the 'notFeature' property.
|
void |
removeXref(Xref xref)
Removes a value for the 'xref' property.
|
CellularLocationVocabulary |
setCellularLocation()
Sets the 'cellularLocation' property value to an anonymous node
|
void |
setCellularLocation(CellularLocationVocabulary cellularLocation)
Sets the 'cellularLocation' property value
|
CellularLocationVocabulary |
setCellularLocation(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'cellularLocation' property value
|
void |
unregisterListener(ThingListener listener) |
public java.util.List listStatements()
public void clearCache()
public java.util.Iterator getDataSource() throws JastorException
Entity
getDataSource
in interface Entity
Iterator
of Provenance
JastorException
Entity.dataSourceProperty
public void addDataSource(Provenance dataSource) throws JastorException
Entity
addDataSource
in interface Entity
JastorException
Entity.dataSourceProperty
public Provenance addDataSource() throws JastorException
Entity
addDataSource
in interface Entity
Provenance
createdJastorException
Entity.dataSourceProperty
public Provenance addDataSource(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
Entity
addDataSource
in interface Entity
JastorException
Entity.dataSourceProperty
public void removeDataSource(Provenance dataSource) throws JastorException
Entity
removeDataSource
in interface Entity
JastorException
Entity.dataSourceProperty
public java.util.Iterator getAvailability() throws JastorException
Entity
getAvailability
in interface Entity
Iterator
of String
JastorException
Entity.availabilityProperty
public void addAvailability(java.lang.String availability) throws JastorException
Entity
addAvailability
in interface Entity
JastorException
Entity.availabilityProperty
public void removeAvailability(java.lang.String availability) throws JastorException
Entity
removeAvailability
in interface Entity
JastorException
Entity.availabilityProperty
public java.util.Iterator getComment() throws JastorException
Entity
getComment
in interface Entity
Iterator
of String
JastorException
Entity.commentProperty
public void addComment(java.lang.String comment) throws JastorException
Entity
addComment
in interface Entity
JastorException
Entity.commentProperty
public void removeComment(java.lang.String comment) throws JastorException
Entity
removeComment
in interface Entity
JastorException
Entity.commentProperty
public java.util.Iterator getName() throws JastorException
Entity
getName
in interface Entity
Iterator
of String
JastorException
Entity.nameProperty
public void addName(java.lang.String name) throws JastorException
Entity
addName
in interface Entity
JastorException
Entity.nameProperty
public void removeName(java.lang.String name) throws JastorException
Entity
removeName
in interface Entity
JastorException
Entity.nameProperty
public java.util.Iterator getEvidence() throws JastorException
Entity
getEvidence
in interface Entity
Iterator
of Evidence
JastorException
Entity.evidenceProperty
public void addEvidence(Evidence evidence) throws JastorException
Entity
addEvidence
in interface Entity
JastorException
Entity.evidenceProperty
public Evidence addEvidence() throws JastorException
Entity
addEvidence
in interface Entity
Evidence
createdJastorException
Entity.evidenceProperty
public Evidence addEvidence(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
Entity
addEvidence
in interface Entity
JastorException
Entity.evidenceProperty
public void removeEvidence(Evidence evidence) throws JastorException
Entity
removeEvidence
in interface Entity
JastorException
Entity.evidenceProperty
public java.util.Iterator getXref() throws JastorException
Entity
getXref
in interface Entity
Iterator
of Xref
JastorException
Entity.xrefProperty
public void addXref(Xref xref) throws JastorException
Entity
addXref
in interface Entity
JastorException
Entity.xrefProperty
public Xref addXref() throws JastorException
Entity
addXref
in interface Entity
Xref
createdJastorException
Entity.xrefProperty
public Xref addXref(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
Entity
addXref
in interface Entity
JastorException
Entity.xrefProperty
public void removeXref(Xref xref) throws JastorException
Entity
removeXref
in interface Entity
JastorException
Entity.xrefProperty
public java.util.Iterator getFeature() throws JastorException
PhysicalEntity
getFeature
in interface PhysicalEntity
Iterator
of EntityFeature
JastorException
PhysicalEntity.featureProperty
public void addFeature(EntityFeature feature) throws JastorException
PhysicalEntity
addFeature
in interface PhysicalEntity
JastorException
PhysicalEntity.featureProperty
public EntityFeature addFeature() throws JastorException
PhysicalEntity
addFeature
in interface PhysicalEntity
EntityFeature
createdJastorException
PhysicalEntity.featureProperty
public EntityFeature addFeature(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
PhysicalEntity
addFeature
in interface PhysicalEntity
JastorException
PhysicalEntity.featureProperty
public void removeFeature(EntityFeature feature) throws JastorException
PhysicalEntity
removeFeature
in interface PhysicalEntity
JastorException
PhysicalEntity.featureProperty
public java.util.Iterator getNotFeature() throws JastorException
PhysicalEntity
getNotFeature
in interface PhysicalEntity
Iterator
of EntityFeature
JastorException
PhysicalEntity.notFeatureProperty
public void addNotFeature(EntityFeature notFeature) throws JastorException
PhysicalEntity
addNotFeature
in interface PhysicalEntity
JastorException
PhysicalEntity.notFeatureProperty
public EntityFeature addNotFeature() throws JastorException
PhysicalEntity
addNotFeature
in interface PhysicalEntity
EntityFeature
createdJastorException
PhysicalEntity.notFeatureProperty
public EntityFeature addNotFeature(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
PhysicalEntity
addNotFeature
in interface PhysicalEntity
JastorException
PhysicalEntity.notFeatureProperty
public void removeNotFeature(EntityFeature notFeature) throws JastorException
PhysicalEntity
removeNotFeature
in interface PhysicalEntity
JastorException
PhysicalEntity.notFeatureProperty
public java.util.Iterator getMemberPhysicalEntity() throws JastorException
PhysicalEntity
getMemberPhysicalEntity
in interface PhysicalEntity
Iterator
of PhysicalEntity
JastorException
PhysicalEntity.memberPhysicalEntityProperty
public void addMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity) throws JastorException
PhysicalEntity
addMemberPhysicalEntity
in interface PhysicalEntity
JastorException
PhysicalEntity.memberPhysicalEntityProperty
public PhysicalEntity addMemberPhysicalEntity() throws JastorException
PhysicalEntity
addMemberPhysicalEntity
in interface PhysicalEntity
PhysicalEntity
createdJastorException
PhysicalEntity.memberPhysicalEntityProperty
public PhysicalEntity addMemberPhysicalEntity(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
PhysicalEntity
addMemberPhysicalEntity
in interface PhysicalEntity
JastorException
PhysicalEntity.memberPhysicalEntityProperty
public void removeMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity) throws JastorException
PhysicalEntity
removeMemberPhysicalEntity
in interface PhysicalEntity
JastorException
PhysicalEntity.memberPhysicalEntityProperty
public CellularLocationVocabulary getCellularLocation() throws JastorException
PhysicalEntity
getCellularLocation
in interface PhysicalEntity
CellularLocationVocabulary
JastorException
PhysicalEntity.cellularLocationProperty
public void setCellularLocation(CellularLocationVocabulary cellularLocation) throws JastorException
PhysicalEntity
setCellularLocation
in interface PhysicalEntity
JastorException
PhysicalEntity.cellularLocationProperty
public CellularLocationVocabulary setCellularLocation() throws JastorException
PhysicalEntity
setCellularLocation
in interface PhysicalEntity
CellularLocationVocabulary
, the created valueJastorException
PhysicalEntity.cellularLocationProperty
public CellularLocationVocabulary setCellularLocation(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
PhysicalEntity
setCellularLocation
in interface PhysicalEntity
JastorException
PhysicalEntity.cellularLocationProperty
public void registerListener(ThingListener listener)
public void unregisterListener(ThingListener listener)
public void addedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)
public void removedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)