public interface BioSource extends UtilityClass
(URI: http://www.biopax.org/release/biopax-level3.owl#BioSource)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
cellTypeProperty
The Jena Property for cellType
|
static com.hp.hpl.jena.rdf.model.Property |
nameProperty
The Jena Property for name
|
static com.hp.hpl.jena.rdf.model.Property |
tissueProperty
The Jena Property for tissue
|
static Resource |
TYPE
The rdf:type for this ontology class
|
static com.hp.hpl.jena.rdf.model.Property |
xrefProperty
The Jena Property for xref
|
commentProperty
Modifier and Type | Method and Description |
---|---|
void |
addName(java.lang.String name)
Add a 'name' property value
|
Xref |
addXref()
Adds an anonymous value for the 'xref' property
|
Xref |
addXref(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'xref' property.
|
void |
addXref(Xref xref)
Adds a value for the 'xref' property
|
CellVocabulary |
getCellType()
Gets the 'cellType' property value
|
java.util.Iterator |
getName()
Iterates through the 'name' property values.
|
TissueVocabulary |
getTissue()
Gets the 'tissue' property value
|
java.util.Iterator |
getXref()
Get an Iterator the 'xref' property values.
|
void |
removeName(java.lang.String name)
Remove a 'name' property value.
|
void |
removeXref(Xref xref)
Removes a value for the 'xref' property.
|
CellVocabulary |
setCellType()
Sets the 'cellType' property value to an anonymous node
|
void |
setCellType(CellVocabulary cellType)
Sets the 'cellType' property value
|
CellVocabulary |
setCellType(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'cellType' property value to the given resource, and add's rdf:type properties.
|
TissueVocabulary |
setTissue()
Sets the 'tissue' property value to an anonymous node
|
TissueVocabulary |
setTissue(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'tissue' property value to the given resource, and add's rdf:type properties.
|
void |
setTissue(TissueVocabulary tissue)
Sets the 'tissue' property value
|
addComment, getComment, removeComment
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property tissueProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#tissue)
static final com.hp.hpl.jena.rdf.model.Property cellTypeProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#cellType)
static final com.hp.hpl.jena.rdf.model.Property nameProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#name)
static final com.hp.hpl.jena.rdf.model.Property xrefProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#xref)
TissueVocabulary getTissue() throws com.ibm.adtech.jastor.JastorException
TissueVocabulary
com.ibm.adtech.jastor.JastorException
tissueProperty
void setTissue(TissueVocabulary tissue) throws com.ibm.adtech.jastor.JastorException
{@link
- fr.curie.BiNoM.pathways.biopax.TissueVocabulary}com.ibm.adtech.jastor.JastorException
tissueProperty
TissueVocabulary setTissue() throws com.ibm.adtech.jastor.JastorException
TissueVocabulary
, the created valuecom.ibm.adtech.jastor.JastorException
tissueProperty
TissueVocabulary setTissue(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
TissueVocabulary
with the factory.
and calling setTissue(fr.curie.BiNoM.pathways.biopax.TissueVocabulary tissue)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#TissueVocabulary. That is, this method
should not be used as a shortcut for creating new objects in the model.{@link
- com.hp.hpl.jena.rdf.model.Resource} must not be be null.TissueVocabulary
, the newly created valuecom.ibm.adtech.jastor.JastorException
tissueProperty
CellVocabulary getCellType() throws com.ibm.adtech.jastor.JastorException
CellVocabulary
com.ibm.adtech.jastor.JastorException
cellTypeProperty
void setCellType(CellVocabulary cellType) throws com.ibm.adtech.jastor.JastorException
{@link
- fr.curie.BiNoM.pathways.biopax.CellVocabulary}com.ibm.adtech.jastor.JastorException
cellTypeProperty
CellVocabulary setCellType() throws com.ibm.adtech.jastor.JastorException
CellVocabulary
, the created valuecom.ibm.adtech.jastor.JastorException
cellTypeProperty
CellVocabulary setCellType(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
CellVocabulary
with the factory.
and calling setCellType(fr.curie.BiNoM.pathways.biopax.CellVocabulary cellType)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#CellVocabulary. That is, this method
should not be used as a shortcut for creating new objects in the model.{@link
- com.hp.hpl.jena.rdf.model.Resource} must not be be null.CellVocabulary
, the newly created valuecom.ibm.adtech.jastor.JastorException
cellTypeProperty
java.util.Iterator getName() throws com.ibm.adtech.jastor.JastorException
Iterator
of String
com.ibm.adtech.jastor.JastorException
nameProperty
void addName(java.lang.String name) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to addcom.ibm.adtech.jastor.JastorException
nameProperty
void removeName(java.lang.String name) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to removecom.ibm.adtech.jastor.JastorException
nameProperty
java.util.Iterator getXref() throws com.ibm.adtech.jastor.JastorException
Iterator
of Xref
com.ibm.adtech.jastor.JastorException
xrefProperty
void addXref(Xref xref) throws com.ibm.adtech.jastor.JastorException
The
- Xref
to addcom.ibm.adtech.jastor.JastorException
xrefProperty
Xref addXref() throws com.ibm.adtech.jastor.JastorException
Xref
createdcom.ibm.adtech.jastor.JastorException
xrefProperty
Xref addXref(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Xref
with the factory
and calling addXref(fr.curie.BiNoM.pathways.biopax.Xref xref)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Xref. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
xrefProperty
void removeXref(Xref xref) throws com.ibm.adtech.jastor.JastorException
The
- Xref
to removecom.ibm.adtech.jastor.JastorException
xrefProperty