public interface Protein extends PhysicalEntity
(URI: http://www.biopax.org/release/biopax-level3.owl#Protein)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
entityReferenceProperty
The Jena Property for entityReference
|
static Resource |
TYPE
The rdf:type for this ontology class
|
cellularLocationProperty, featureProperty, memberPhysicalEntityProperty, notFeatureProperty
availabilityProperty, commentProperty, dataSourceProperty, evidenceProperty, nameProperty, xrefProperty
Modifier and Type | Method and Description |
---|---|
Protein |
addMemberPhysicalEntity_asProtein()
Adds an anonymous value for the 'memberPhysicalEntity' property
|
Protein |
addMemberPhysicalEntity_asProtein(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'memberPhysicalEntity' property.
|
void |
addMemberPhysicalEntity(Protein memberPhysicalEntity)
Adds a value for the 'memberPhysicalEntity' property
|
ProteinReference |
getEntityReference_asProteinReference()
Gets the 'entityReference' property value
|
EntityReference |
getEntityReference()
Gets the 'entityReference' property value
|
java.util.Iterator |
getMemberPhysicalEntity_asProtein()
Get an Iterator the 'memberPhysicalEntity' property values.
|
void |
removeMemberPhysicalEntity(Protein memberPhysicalEntity)
Removes a value for the 'memberPhysicalEntity' property.
|
ProteinReference |
setEntityReference_asProteinReference()
Sets the 'entityReference' property value to an anonymous node
|
ProteinReference |
setEntityReference_asProteinReference(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'entityReference' property value to the given resource, and add's rdf:type properties.
|
EntityReference |
setEntityReference()
Sets the 'entityReference' property value to an anonymous node
|
EntityReference |
setEntityReference(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'entityReference' property value to the given resource, and add's rdf:type properties.
|
void |
setEntityReference(EntityReference entityReference)
Sets the 'entityReference' property value
|
addFeature, addFeature, addFeature, addMemberPhysicalEntity, addMemberPhysicalEntity, addNotFeature, addNotFeature, addNotFeature, getCellularLocation, getFeature, getMemberPhysicalEntity, getNotFeature, removeFeature, removeMemberPhysicalEntity, removeNotFeature, setCellularLocation, setCellularLocation, setCellularLocation
addAvailability, addComment, addDataSource, addDataSource, addDataSource, addEvidence, addEvidence, addEvidence, addName, addXref, addXref, addXref, getAvailability, getComment, getDataSource, getEvidence, getName, getXref, removeAvailability, removeComment, removeDataSource, removeEvidence, removeName, removeXref
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property entityReferenceProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#entityReference)
java.util.Iterator getMemberPhysicalEntity_asProtein() throws com.ibm.adtech.jastor.JastorException
Iterator
of Protein
com.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
void addMemberPhysicalEntity(Protein memberPhysicalEntity) throws com.ibm.adtech.jastor.JastorException
addMemberPhysicalEntity
in interface PhysicalEntity
The
- Protein
to addcom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
Protein addMemberPhysicalEntity_asProtein() throws com.ibm.adtech.jastor.JastorException
Protein
createdcom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
Protein addMemberPhysicalEntity_asProtein(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Protein
with the factory
and calling addMemberPhysicalEntity(fr.curie.BiNoM.pathways.biopax.Protein memberPhysicalEntity)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Protein. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
void removeMemberPhysicalEntity(Protein memberPhysicalEntity) throws com.ibm.adtech.jastor.JastorException
The
- Protein
to removecom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
EntityReference getEntityReference() throws com.ibm.adtech.jastor.JastorException
EntityReference
com.ibm.adtech.jastor.JastorException
entityReferenceProperty
void setEntityReference(EntityReference entityReference) throws com.ibm.adtech.jastor.JastorException
{@link
- fr.curie.BiNoM.pathways.biopax.EntityReference}com.ibm.adtech.jastor.JastorException
entityReferenceProperty
EntityReference setEntityReference() throws com.ibm.adtech.jastor.JastorException
EntityReference
, the created valuecom.ibm.adtech.jastor.JastorException
entityReferenceProperty
EntityReference setEntityReference(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
EntityReference
with the factory.
and calling setEntityReference(fr.curie.BiNoM.pathways.biopax.EntityReference entityReference)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#EntityReference. That is, this method
should not be used as a shortcut for creating new objects in the model.{@link
- com.hp.hpl.jena.rdf.model.Resource} must not be be null.EntityReference
, the newly created valuecom.ibm.adtech.jastor.JastorException
entityReferenceProperty
ProteinReference getEntityReference_asProteinReference() throws com.ibm.adtech.jastor.JastorException
ProteinReference
com.ibm.adtech.jastor.JastorException
entityReferenceProperty
ProteinReference setEntityReference_asProteinReference() throws com.ibm.adtech.jastor.JastorException
ProteinReference
, the created valuecom.ibm.adtech.jastor.JastorException
entityReferenceProperty
ProteinReference setEntityReference_asProteinReference(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
ProteinReference
with the factory.
and calling setEntityReference(fr.curie.BiNoM.pathways.biopax.ProteinReference entityReference)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#ProteinReference. That is, this method
should not be used as a shortcut for creating new objects in the model.{@link
- com.hp.hpl.jena.rdf.model.Resource} must not be be null.ProteinReference
, the newly created valuecom.ibm.adtech.jastor.JastorException
entityReferenceProperty