public class InteractionGraph
extends java.lang.Object
Modifier and Type | Class and Description |
---|---|
protected class |
InteractionGraph.IntEdge |
class |
InteractionGraph.NodeDegree |
Modifier and Type | Field and Description |
---|---|
protected java.util.ArrayList<InteractionGraph.NodeDegree> |
degrees |
protected java.util.ArrayList<InteractionGraph.IntEdge> |
graph |
protected java.util.ArrayList<java.lang.String> |
interaction |
protected GraphPerspective |
network |
protected java.util.ArrayList<CyNode> |
nodes |
Modifier and Type | Method and Description |
---|---|
protected void |
computeDegrees() |
protected void |
createGraph() |
protected int[][] |
shortPathMatrixByBFS() |
protected GraphPerspective network
protected java.util.ArrayList<CyNode> nodes
protected java.util.ArrayList<InteractionGraph.IntEdge> graph
protected java.util.ArrayList<java.lang.String> interaction
protected java.util.ArrayList<InteractionGraph.NodeDegree> degrees