public interface Complex extends PhysicalEntity
(URI: http://www.biopax.org/release/biopax-level3.owl#Complex)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
componentProperty
The Jena Property for component
|
static com.hp.hpl.jena.rdf.model.Property |
componentStoichiometryProperty
The Jena Property for componentStoichiometry
|
static Resource |
TYPE
The rdf:type for this ontology class
|
cellularLocationProperty, featureProperty, memberPhysicalEntityProperty, notFeatureProperty
availabilityProperty, commentProperty, dataSourceProperty, evidenceProperty, nameProperty, xrefProperty
Modifier and Type | Method and Description |
---|---|
PhysicalEntity |
addComponent()
Adds an anonymous value for the 'component' property
|
PhysicalEntity |
addComponent(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'component' property.
|
void |
addComponent(PhysicalEntity component)
Adds a value for the 'component' property
|
Stoichiometry |
addComponentStoichiometry()
Adds an anonymous value for the 'componentStoichiometry' property
|
Stoichiometry |
addComponentStoichiometry(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'componentStoichiometry' property.
|
void |
addComponentStoichiometry(Stoichiometry componentStoichiometry)
Adds a value for the 'componentStoichiometry' property
|
Complex |
addMemberPhysicalEntity_asComplex()
Adds an anonymous value for the 'memberPhysicalEntity' property
|
Complex |
addMemberPhysicalEntity_asComplex(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'memberPhysicalEntity' property.
|
void |
addMemberPhysicalEntity(Complex memberPhysicalEntity)
Adds a value for the 'memberPhysicalEntity' property
|
java.util.Iterator |
getComponent()
Get an Iterator the 'component' property values.
|
java.util.Iterator |
getComponentStoichiometry()
Get an Iterator the 'componentStoichiometry' property values.
|
java.util.Iterator |
getMemberPhysicalEntity_asComplex()
Get an Iterator the 'memberPhysicalEntity' property values.
|
void |
removeComponent(PhysicalEntity component)
Removes a value for the 'component' property.
|
void |
removeComponentStoichiometry(Stoichiometry componentStoichiometry)
Removes a value for the 'componentStoichiometry' property.
|
void |
removeMemberPhysicalEntity(Complex memberPhysicalEntity)
Removes a value for the 'memberPhysicalEntity' property.
|
addFeature, addFeature, addFeature, addMemberPhysicalEntity, addMemberPhysicalEntity, addNotFeature, addNotFeature, addNotFeature, getCellularLocation, getFeature, getMemberPhysicalEntity, getNotFeature, removeFeature, removeMemberPhysicalEntity, removeNotFeature, setCellularLocation, setCellularLocation, setCellularLocation
addAvailability, addComment, addDataSource, addDataSource, addDataSource, addEvidence, addEvidence, addEvidence, addName, addXref, addXref, addXref, getAvailability, getComment, getDataSource, getEvidence, getName, getXref, removeAvailability, removeComment, removeDataSource, removeEvidence, removeName, removeXref
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property componentProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#component)
static final com.hp.hpl.jena.rdf.model.Property componentStoichiometryProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#componentStoichiometry)
java.util.Iterator getMemberPhysicalEntity_asComplex() throws com.ibm.adtech.jastor.JastorException
Iterator
of Complex
com.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
void addMemberPhysicalEntity(Complex memberPhysicalEntity) throws com.ibm.adtech.jastor.JastorException
addMemberPhysicalEntity
in interface PhysicalEntity
The
- Complex
to addcom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
Complex addMemberPhysicalEntity_asComplex() throws com.ibm.adtech.jastor.JastorException
Complex
createdcom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
Complex addMemberPhysicalEntity_asComplex(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Complex
with the factory
and calling addMemberPhysicalEntity(fr.curie.BiNoM.pathways.biopax.Complex memberPhysicalEntity)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Complex. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
void removeMemberPhysicalEntity(Complex memberPhysicalEntity) throws com.ibm.adtech.jastor.JastorException
The
- Complex
to removecom.ibm.adtech.jastor.JastorException
PhysicalEntity.memberPhysicalEntityProperty
java.util.Iterator getComponent() throws com.ibm.adtech.jastor.JastorException
Iterator
of PhysicalEntity
com.ibm.adtech.jastor.JastorException
componentProperty
void addComponent(PhysicalEntity component) throws com.ibm.adtech.jastor.JastorException
The
- PhysicalEntity
to addcom.ibm.adtech.jastor.JastorException
componentProperty
PhysicalEntity addComponent() throws com.ibm.adtech.jastor.JastorException
PhysicalEntity
createdcom.ibm.adtech.jastor.JastorException
componentProperty
PhysicalEntity addComponent(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
PhysicalEntity
with the factory
and calling addComponent(fr.curie.BiNoM.pathways.biopax.PhysicalEntity component)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#PhysicalEntity. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
componentProperty
void removeComponent(PhysicalEntity component) throws com.ibm.adtech.jastor.JastorException
The
- PhysicalEntity
to removecom.ibm.adtech.jastor.JastorException
componentProperty
java.util.Iterator getComponentStoichiometry() throws com.ibm.adtech.jastor.JastorException
Iterator
of Stoichiometry
com.ibm.adtech.jastor.JastorException
componentStoichiometryProperty
void addComponentStoichiometry(Stoichiometry componentStoichiometry) throws com.ibm.adtech.jastor.JastorException
The
- Stoichiometry
to addcom.ibm.adtech.jastor.JastorException
componentStoichiometryProperty
Stoichiometry addComponentStoichiometry() throws com.ibm.adtech.jastor.JastorException
Stoichiometry
createdcom.ibm.adtech.jastor.JastorException
componentStoichiometryProperty
Stoichiometry addComponentStoichiometry(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Stoichiometry
with the factory
and calling addComponentStoichiometry(fr.curie.BiNoM.pathways.biopax.Stoichiometry componentStoichiometry)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Stoichiometry. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
componentStoichiometryProperty
void removeComponentStoichiometry(Stoichiometry componentStoichiometry) throws com.ibm.adtech.jastor.JastorException
The
- Stoichiometry
to removecom.ibm.adtech.jastor.JastorException
componentStoichiometryProperty