public class CellDesigner
extends java.lang.Object
Modifier and Type | Field and Description |
---|---|
static java.util.HashMap |
entities
Map from Species Ids to all CellDesigner objects
|
static java.lang.String[] |
reactionNodeTypes |
Constructor and Description |
---|
CellDesigner() |
Modifier and Type | Method and Description |
---|---|
static java.util.HashMap |
getAllObjectsHash(SbmlDocument sbmlDoc) |
static java.util.HashMap |
getEntities(SbmlDocument sbmlDoc)
Fills entities map
|
static java.util.HashMap<java.lang.String,java.lang.String> |
getEntitiesNames(SbmlDocument sbmlDoc) |
static org.sbml.x2001.ns.celldesigner.SbmlDocument |
loadCellDesigner(java.lang.String fn)
Loads org.sbml.x2001.ns.celldesigner.SbmlDocument from file
|
static org.sbml.x2001.ns.celldesigner.SbmlDocument |
loadCellDesignerFromText(java.lang.String text)
Load org.sbml.x2001.ns.celldesigner.SbmlDocument from String
|
static void |
main(java.lang.String[] args)
Save org.sbml.x2001.ns.celldesigner.SbmlDocument to file
|
static void |
saveCellDesigner(SbmlDocument sbml,
java.lang.String fn) |
public static java.lang.String[] reactionNodeTypes
public static java.util.HashMap entities
public static void main(java.lang.String[] args)
sbml
- fn
- public static void saveCellDesigner(SbmlDocument sbml, java.lang.String fn)
public static org.sbml.x2001.ns.celldesigner.SbmlDocument loadCellDesigner(java.lang.String fn)
fn
- public static org.sbml.x2001.ns.celldesigner.SbmlDocument loadCellDesignerFromText(java.lang.String text)
text
- String containing Cell Designer xml textpublic static java.util.HashMap getEntities(SbmlDocument sbmlDoc)
sbmlDoc
- public static java.util.HashMap<java.lang.String,java.lang.String> getEntitiesNames(SbmlDocument sbmlDoc)
public static java.util.HashMap getAllObjectsHash(SbmlDocument sbmlDoc)