public interface Entity
(URI: http://www.biopax.org/release/biopax-level3.owl#Entity)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
availabilityProperty
The Jena Property for availability
|
static com.hp.hpl.jena.rdf.model.Property |
commentProperty
The Jena Property for comment
|
static com.hp.hpl.jena.rdf.model.Property |
dataSourceProperty
The Jena Property for dataSource
|
static com.hp.hpl.jena.rdf.model.Property |
evidenceProperty
The Jena Property for evidence
|
static com.hp.hpl.jena.rdf.model.Property |
nameProperty
The Jena Property for name
|
static Resource |
TYPE
The rdf:type for this ontology class
|
static com.hp.hpl.jena.rdf.model.Property |
xrefProperty
The Jena Property for xref
|
Modifier and Type | Method and Description |
---|---|
void |
addAvailability(java.lang.String availability)
Add a 'availability' property value
|
void |
addComment(java.lang.String comment)
Add a 'comment' property value
|
Provenance |
addDataSource()
Adds an anonymous value for the 'dataSource' property
|
Provenance |
addDataSource(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'dataSource' property.
|
void |
addDataSource(Provenance dataSource)
Adds a value for the 'dataSource' property
|
Evidence |
addEvidence()
Adds an anonymous value for the 'evidence' property
|
Evidence |
addEvidence(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'evidence' property.
|
void |
addEvidence(Evidence evidence)
Adds a value for the 'evidence' property
|
void |
addName(java.lang.String name)
Add a 'name' property value
|
Xref |
addXref()
Adds an anonymous value for the 'xref' property
|
Xref |
addXref(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'xref' property.
|
void |
addXref(Xref xref)
Adds a value for the 'xref' property
|
java.util.Iterator |
getAvailability()
Iterates through the 'availability' property values.
|
java.util.Iterator |
getComment()
Iterates through the 'comment' property values.
|
java.util.Iterator |
getDataSource()
Get an Iterator the 'dataSource' property values.
|
java.util.Iterator |
getEvidence()
Get an Iterator the 'evidence' property values.
|
java.util.Iterator |
getName()
Iterates through the 'name' property values.
|
java.util.Iterator |
getXref()
Get an Iterator the 'xref' property values.
|
void |
removeAvailability(java.lang.String availability)
Remove a 'availability' property value.
|
void |
removeComment(java.lang.String comment)
Remove a 'comment' property value.
|
void |
removeDataSource(Provenance dataSource)
Removes a value for the 'dataSource' property.
|
void |
removeEvidence(Evidence evidence)
Removes a value for the 'evidence' property.
|
void |
removeName(java.lang.String name)
Remove a 'name' property value.
|
void |
removeXref(Xref xref)
Removes a value for the 'xref' property.
|
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property dataSourceProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#dataSource)
static final com.hp.hpl.jena.rdf.model.Property availabilityProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#availability)
static final com.hp.hpl.jena.rdf.model.Property commentProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#comment)
static final com.hp.hpl.jena.rdf.model.Property nameProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#name)
static final com.hp.hpl.jena.rdf.model.Property evidenceProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#evidence)
static final com.hp.hpl.jena.rdf.model.Property xrefProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#xref)
java.util.Iterator getDataSource() throws com.ibm.adtech.jastor.JastorException
Iterator
of Provenance
com.ibm.adtech.jastor.JastorException
dataSourceProperty
void addDataSource(Provenance dataSource) throws com.ibm.adtech.jastor.JastorException
The
- Provenance
to addcom.ibm.adtech.jastor.JastorException
dataSourceProperty
Provenance addDataSource() throws com.ibm.adtech.jastor.JastorException
Provenance
createdcom.ibm.adtech.jastor.JastorException
dataSourceProperty
Provenance addDataSource(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Provenance
with the factory
and calling addDataSource(fr.curie.BiNoM.pathways.biopax.Provenance dataSource)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Provenance. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
dataSourceProperty
void removeDataSource(Provenance dataSource) throws com.ibm.adtech.jastor.JastorException
The
- Provenance
to removecom.ibm.adtech.jastor.JastorException
dataSourceProperty
java.util.Iterator getAvailability() throws com.ibm.adtech.jastor.JastorException
Iterator
of String
com.ibm.adtech.jastor.JastorException
availabilityProperty
void addAvailability(java.lang.String availability) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to addcom.ibm.adtech.jastor.JastorException
availabilityProperty
void removeAvailability(java.lang.String availability) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to removecom.ibm.adtech.jastor.JastorException
availabilityProperty
java.util.Iterator getComment() throws com.ibm.adtech.jastor.JastorException
Iterator
of String
com.ibm.adtech.jastor.JastorException
commentProperty
void addComment(java.lang.String comment) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to addcom.ibm.adtech.jastor.JastorException
commentProperty
void removeComment(java.lang.String comment) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to removecom.ibm.adtech.jastor.JastorException
commentProperty
java.util.Iterator getName() throws com.ibm.adtech.jastor.JastorException
Iterator
of String
com.ibm.adtech.jastor.JastorException
nameProperty
void addName(java.lang.String name) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to addcom.ibm.adtech.jastor.JastorException
nameProperty
void removeName(java.lang.String name) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}, the value to removecom.ibm.adtech.jastor.JastorException
nameProperty
java.util.Iterator getEvidence() throws com.ibm.adtech.jastor.JastorException
Iterator
of Evidence
com.ibm.adtech.jastor.JastorException
evidenceProperty
void addEvidence(Evidence evidence) throws com.ibm.adtech.jastor.JastorException
The
- Evidence
to addcom.ibm.adtech.jastor.JastorException
evidenceProperty
Evidence addEvidence() throws com.ibm.adtech.jastor.JastorException
Evidence
createdcom.ibm.adtech.jastor.JastorException
evidenceProperty
Evidence addEvidence(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Evidence
with the factory
and calling addEvidence(fr.curie.BiNoM.pathways.biopax.Evidence evidence)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Evidence. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
evidenceProperty
void removeEvidence(Evidence evidence) throws com.ibm.adtech.jastor.JastorException
The
- Evidence
to removecom.ibm.adtech.jastor.JastorException
evidenceProperty
java.util.Iterator getXref() throws com.ibm.adtech.jastor.JastorException
Iterator
of Xref
com.ibm.adtech.jastor.JastorException
xrefProperty
void addXref(Xref xref) throws com.ibm.adtech.jastor.JastorException
The
- Xref
to addcom.ibm.adtech.jastor.JastorException
xrefProperty
Xref addXref() throws com.ibm.adtech.jastor.JastorException
Xref
createdcom.ibm.adtech.jastor.JastorException
xrefProperty
Xref addXref(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Xref
with the factory
and calling addXref(fr.curie.BiNoM.pathways.biopax.Xref xref)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Xref. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
xrefProperty
void removeXref(Xref xref) throws com.ibm.adtech.jastor.JastorException
The
- Xref
to removecom.ibm.adtech.jastor.JastorException
xrefProperty