public interface Catalysis extends Control
(URI: http://www.biopax.org/release/biopax-level3.owl#Catalysis)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
catalysisDirectionProperty
The Jena Property for catalysisDirection
|
static com.hp.hpl.jena.rdf.model.Property |
cofactorProperty
The Jena Property for cofactor
|
static Resource |
TYPE
The rdf:type for this ontology class
|
controlledProperty, controllerProperty, controlTypeProperty
interactionTypeProperty, participantProperty
availabilityProperty, commentProperty, dataSourceProperty, evidenceProperty, nameProperty, xrefProperty
Modifier and Type | Method and Description |
---|---|
PhysicalEntity |
addCofactor()
Adds an anonymous value for the 'cofactor' property
|
PhysicalEntity |
addCofactor(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'cofactor' property.
|
void |
addCofactor(PhysicalEntity cofactor)
Adds a value for the 'cofactor' property
|
java.lang.String |
getCatalysisDirection()
Gets the 'catalysisDirection' property value
|
java.util.Iterator |
getCofactor()
Get an Iterator the 'cofactor' property values.
|
Conversion |
getControlled_asConversion()
Gets the 'controlled' property value
|
void |
removeCofactor(PhysicalEntity cofactor)
Removes a value for the 'cofactor' property.
|
void |
setCatalysisDirection(java.lang.String catalysisDirection)
Sets the 'catalysisDirection' property value
|
Conversion |
setControlled_asConversion()
Sets the 'controlled' property value to an anonymous node
|
Conversion |
setControlled_asConversion(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'controlled' property value to the given resource, and add's rdf:type properties.
|
void |
setControlled(Conversion controlled)
Sets the 'controlled' property value
|
addController_asPathway, addController_asPathway, addController_asPhysicalEntity, addController_asPhysicalEntity, addController, addController, getControlled_asInteraction, getControlled_asPathway, getController_asPathway, getController_asPhysicalEntity, getControlType, removeController, removeController, setControlled_asInteraction, setControlled_asInteraction, setControlled_asPathway, setControlled_asPathway, setControlled, setControlled, setControlType
addParticipant, addParticipant, addParticipant, getInteractionType, getParticipant, removeParticipant, setInteractionType, setInteractionType, setInteractionType
addAvailability, addComment, addDataSource, addDataSource, addDataSource, addEvidence, addEvidence, addEvidence, addName, addXref, addXref, addXref, getAvailability, getComment, getDataSource, getEvidence, getName, getXref, removeAvailability, removeComment, removeDataSource, removeEvidence, removeName, removeXref
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property catalysisDirectionProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#catalysisDirection)
static final com.hp.hpl.jena.rdf.model.Property cofactorProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#cofactor)
Conversion getControlled_asConversion() throws com.ibm.adtech.jastor.JastorException
Conversion
com.ibm.adtech.jastor.JastorException
Control.controlledProperty
void setControlled(Conversion controlled) throws com.ibm.adtech.jastor.JastorException
{@link
- fr.curie.BiNoM.pathways.biopax.Conversion}com.ibm.adtech.jastor.JastorException
Control.controlledProperty
Conversion setControlled_asConversion() throws com.ibm.adtech.jastor.JastorException
Conversion
, the created valuecom.ibm.adtech.jastor.JastorException
Control.controlledProperty
Conversion setControlled_asConversion(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
Conversion
with the factory.
and calling setControlled(fr.curie.BiNoM.pathways.biopax.Conversion controlled)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#Conversion. That is, this method
should not be used as a shortcut for creating new objects in the model.{@link
- com.hp.hpl.jena.rdf.model.Resource} must not be be null.Conversion
, the newly created valuecom.ibm.adtech.jastor.JastorException
Control.controlledProperty
java.lang.String getCatalysisDirection() throws com.ibm.adtech.jastor.JastorException
String
com.ibm.adtech.jastor.JastorException
catalysisDirectionProperty
void setCatalysisDirection(java.lang.String catalysisDirection) throws com.ibm.adtech.jastor.JastorException
{@link
- java.lang.String}com.ibm.adtech.jastor.JastorException
catalysisDirectionProperty
java.util.Iterator getCofactor() throws com.ibm.adtech.jastor.JastorException
Iterator
of PhysicalEntity
com.ibm.adtech.jastor.JastorException
cofactorProperty
void addCofactor(PhysicalEntity cofactor) throws com.ibm.adtech.jastor.JastorException
The
- PhysicalEntity
to addcom.ibm.adtech.jastor.JastorException
cofactorProperty
PhysicalEntity addCofactor() throws com.ibm.adtech.jastor.JastorException
PhysicalEntity
createdcom.ibm.adtech.jastor.JastorException
cofactorProperty
PhysicalEntity addCofactor(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
PhysicalEntity
with the factory
and calling addCofactor(fr.curie.BiNoM.pathways.biopax.PhysicalEntity cofactor)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#PhysicalEntity. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
cofactorProperty
void removeCofactor(PhysicalEntity cofactor) throws com.ibm.adtech.jastor.JastorException
The
- PhysicalEntity
to removecom.ibm.adtech.jastor.JastorException
cofactorProperty