public interface PhysicalEntity extends Entity
(URI: http://www.biopax.org/release/biopax-level3.owl#PhysicalEntity)
Modifier and Type | Field and Description |
---|---|
static com.hp.hpl.jena.rdf.model.Property |
cellularLocationProperty
The Jena Property for cellularLocation
|
static com.hp.hpl.jena.rdf.model.Property |
featureProperty
The Jena Property for feature
|
static com.hp.hpl.jena.rdf.model.Property |
memberPhysicalEntityProperty
The Jena Property for memberPhysicalEntity
|
static com.hp.hpl.jena.rdf.model.Property |
notFeatureProperty
The Jena Property for notFeature
|
static Resource |
TYPE
The rdf:type for this ontology class
|
availabilityProperty, commentProperty, dataSourceProperty, evidenceProperty, nameProperty, xrefProperty
Modifier and Type | Method and Description |
---|---|
EntityFeature |
addFeature()
Adds an anonymous value for the 'feature' property
|
EntityFeature |
addFeature(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'feature' property.
|
void |
addFeature(EntityFeature feature)
Adds a value for the 'feature' property
|
PhysicalEntity |
addMemberPhysicalEntity()
Adds an anonymous value for the 'memberPhysicalEntity' property
|
PhysicalEntity |
addMemberPhysicalEntity(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'memberPhysicalEntity' property.
|
void |
addMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity)
Adds a value for the 'memberPhysicalEntity' property
|
EntityFeature |
addNotFeature()
Adds an anonymous value for the 'notFeature' property
|
EntityFeature |
addNotFeature(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'notFeature' property.
|
void |
addNotFeature(EntityFeature notFeature)
Adds a value for the 'notFeature' property
|
CellularLocationVocabulary |
getCellularLocation()
Gets the 'cellularLocation' property value
|
java.util.Iterator |
getFeature()
Get an Iterator the 'feature' property values.
|
java.util.Iterator |
getMemberPhysicalEntity()
Get an Iterator the 'memberPhysicalEntity' property values.
|
java.util.Iterator |
getNotFeature()
Get an Iterator the 'notFeature' property values.
|
void |
removeFeature(EntityFeature feature)
Removes a value for the 'feature' property.
|
void |
removeMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity)
Removes a value for the 'memberPhysicalEntity' property.
|
void |
removeNotFeature(EntityFeature notFeature)
Removes a value for the 'notFeature' property.
|
CellularLocationVocabulary |
setCellularLocation()
Sets the 'cellularLocation' property value to an anonymous node
|
void |
setCellularLocation(CellularLocationVocabulary cellularLocation)
Sets the 'cellularLocation' property value
|
CellularLocationVocabulary |
setCellularLocation(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'cellularLocation' property value to the given resource, and add's rdf:type properties.
|
addAvailability, addComment, addDataSource, addDataSource, addDataSource, addEvidence, addEvidence, addEvidence, addName, addXref, addXref, addXref, getAvailability, getComment, getDataSource, getEvidence, getName, getXref, removeAvailability, removeComment, removeDataSource, removeEvidence, removeName, removeXref
static final Resource TYPE
static final com.hp.hpl.jena.rdf.model.Property featureProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#feature)
static final com.hp.hpl.jena.rdf.model.Property notFeatureProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#notFeature)
static final com.hp.hpl.jena.rdf.model.Property memberPhysicalEntityProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#memberPhysicalEntity)
static final com.hp.hpl.jena.rdf.model.Property cellularLocationProperty
(URI: http://www.biopax.org/release/biopax-level3.owl#cellularLocation)
java.util.Iterator getFeature() throws com.ibm.adtech.jastor.JastorException
Iterator
of EntityFeature
com.ibm.adtech.jastor.JastorException
featureProperty
void addFeature(EntityFeature feature) throws com.ibm.adtech.jastor.JastorException
The
- EntityFeature
to addcom.ibm.adtech.jastor.JastorException
featureProperty
EntityFeature addFeature() throws com.ibm.adtech.jastor.JastorException
EntityFeature
createdcom.ibm.adtech.jastor.JastorException
featureProperty
EntityFeature addFeature(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
EntityFeature
with the factory
and calling addFeature(fr.curie.BiNoM.pathways.biopax.EntityFeature feature)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#EntityFeature. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
featureProperty
void removeFeature(EntityFeature feature) throws com.ibm.adtech.jastor.JastorException
The
- EntityFeature
to removecom.ibm.adtech.jastor.JastorException
featureProperty
java.util.Iterator getNotFeature() throws com.ibm.adtech.jastor.JastorException
Iterator
of EntityFeature
com.ibm.adtech.jastor.JastorException
notFeatureProperty
void addNotFeature(EntityFeature notFeature) throws com.ibm.adtech.jastor.JastorException
The
- EntityFeature
to addcom.ibm.adtech.jastor.JastorException
notFeatureProperty
EntityFeature addNotFeature() throws com.ibm.adtech.jastor.JastorException
EntityFeature
createdcom.ibm.adtech.jastor.JastorException
notFeatureProperty
EntityFeature addNotFeature(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
EntityFeature
with the factory
and calling addNotFeature(fr.curie.BiNoM.pathways.biopax.EntityFeature notFeature)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#EntityFeature. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
notFeatureProperty
void removeNotFeature(EntityFeature notFeature) throws com.ibm.adtech.jastor.JastorException
The
- EntityFeature
to removecom.ibm.adtech.jastor.JastorException
notFeatureProperty
java.util.Iterator getMemberPhysicalEntity() throws com.ibm.adtech.jastor.JastorException
Iterator
of PhysicalEntity
com.ibm.adtech.jastor.JastorException
memberPhysicalEntityProperty
void addMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity) throws com.ibm.adtech.jastor.JastorException
The
- PhysicalEntity
to addcom.ibm.adtech.jastor.JastorException
memberPhysicalEntityProperty
PhysicalEntity addMemberPhysicalEntity() throws com.ibm.adtech.jastor.JastorException
PhysicalEntity
createdcom.ibm.adtech.jastor.JastorException
memberPhysicalEntityProperty
PhysicalEntity addMemberPhysicalEntity(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
PhysicalEntity
with the factory
and calling addMemberPhysicalEntity(fr.curie.BiNoM.pathways.biopax.PhysicalEntity memberPhysicalEntity)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#PhysicalEntity. That is, this method
should not be used as a shortcut for creating new objects in the model.The
- om.hp.hpl.jena.rdf.model.Resource
to addcom.ibm.adtech.jastor.JastorException
memberPhysicalEntityProperty
void removeMemberPhysicalEntity(PhysicalEntity memberPhysicalEntity) throws com.ibm.adtech.jastor.JastorException
The
- PhysicalEntity
to removecom.ibm.adtech.jastor.JastorException
memberPhysicalEntityProperty
CellularLocationVocabulary getCellularLocation() throws com.ibm.adtech.jastor.JastorException
CellularLocationVocabulary
com.ibm.adtech.jastor.JastorException
cellularLocationProperty
void setCellularLocation(CellularLocationVocabulary cellularLocation) throws com.ibm.adtech.jastor.JastorException
{@link
- fr.curie.BiNoM.pathways.biopax.CellularLocationVocabulary}com.ibm.adtech.jastor.JastorException
cellularLocationProperty
CellularLocationVocabulary setCellularLocation() throws com.ibm.adtech.jastor.JastorException
CellularLocationVocabulary
, the created valuecom.ibm.adtech.jastor.JastorException
cellularLocationProperty
CellularLocationVocabulary setCellularLocation(com.hp.hpl.jena.rdf.model.Resource resource) throws com.ibm.adtech.jastor.JastorException
CellularLocationVocabulary
with the factory.
and calling setCellularLocation(fr.curie.BiNoM.pathways.biopax.CellularLocationVocabulary cellularLocation)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#CellularLocationVocabulary. That is, this method
should not be used as a shortcut for creating new objects in the model.{@link
- com.hp.hpl.jena.rdf.model.Resource} must not be be null.CellularLocationVocabulary
, the newly created valuecom.ibm.adtech.jastor.JastorException
cellularLocationProperty