public class SmallMoleculeReferenceImpl extends com.ibm.adtech.jastor.ThingImpl implements SmallMoleculeReference
SmallMoleculeReference
Use the fr.curie.BiNoM.pathways.biopax.biopax_DASH_level3_DOT_owlFactory to create instances of this class.
(URI: http://www.biopax.org/release/biopax-level3.owl#SmallMoleculeReference)
TYPE
Modifier and Type | Method and Description |
---|---|
void |
addComment(java.lang.String comment)
Add a 'comment' property value
|
void |
addedStatement(com.hp.hpl.jena.rdf.model.Statement stmt) |
EntityFeature |
addEntityFeature()
Adds an anonymous value for the 'entityFeature' property
|
EntityFeature |
addEntityFeature(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'entityFeature' property
|
void |
addEntityFeature(EntityFeature entityFeature)
Adds a value for the 'entityFeature' property
|
Evidence |
addEvidence()
Adds an anonymous value for the 'evidence' property
|
Evidence |
addEvidence(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'evidence' property
|
void |
addEvidence(Evidence evidence)
Adds a value for the 'evidence' property
|
SmallMoleculeReference |
addMemberEntityReference_asSmallMoleculeReference()
Adds an anonymous value for the 'memberEntityReference' property
|
SmallMoleculeReference |
addMemberEntityReference_asSmallMoleculeReference(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'memberEntityReference' property.
|
EntityReference |
addMemberEntityReference()
Adds an anonymous value for the 'memberEntityReference' property
|
EntityReference |
addMemberEntityReference(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'memberEntityReference' property
|
void |
addMemberEntityReference(EntityReference memberEntityReference)
Adds a value for the 'memberEntityReference' property
|
void |
addName(java.lang.String name)
Add a 'name' property value
|
Xref |
addXref()
Adds an anonymous value for the 'xref' property
|
Xref |
addXref(com.hp.hpl.jena.rdf.model.Resource resource)
Adds a value for the 'xref' property
|
void |
addXref(Xref xref)
Adds a value for the 'xref' property
|
void |
clearCache() |
java.lang.String |
getChemicalFormula()
Gets the 'chemicalFormula' property value
|
java.util.Iterator |
getComment()
Iterates through the 'comment' property values.
|
java.util.Iterator |
getEntityFeature()
Get an Iterator the 'entityFeature' property values.
|
EntityReferenceTypeVocabulary |
getEntityReferenceType()
Gets the 'entityReferenceType' property value
|
java.util.Iterator |
getEvidence()
Get an Iterator the 'evidence' property values.
|
java.util.Iterator |
getMemberEntityReference_asSmallMoleculeReference()
Get an Iterator the 'memberEntityReference' property values.
|
java.util.Iterator |
getMemberEntityReference()
Get an Iterator the 'memberEntityReference' property values.
|
java.lang.Float |
getMolecularWeight()
Gets the 'molecularWeight' property value
|
java.util.Iterator |
getName()
Iterates through the 'name' property values.
|
ChemicalStructure |
getStructure()
Gets the 'structure' property value
|
java.util.Iterator |
getXref()
Get an Iterator the 'xref' property values.
|
java.util.List |
listStatements() |
void |
registerListener(ThingListener listener) |
void |
removeComment(java.lang.String comment)
Remove a 'comment' property value.
|
void |
removedStatement(com.hp.hpl.jena.rdf.model.Statement stmt) |
void |
removeEntityFeature(EntityFeature entityFeature)
Removes a value for the 'entityFeature' property.
|
void |
removeEvidence(Evidence evidence)
Removes a value for the 'evidence' property.
|
void |
removeMemberEntityReference(EntityReference memberEntityReference)
Removes a value for the 'memberEntityReference' property.
|
void |
removeMemberEntityReference(SmallMoleculeReference memberEntityReference)
Removes a value for the 'memberEntityReference' property.
|
void |
removeName(java.lang.String name)
Remove a 'name' property value.
|
void |
removeXref(Xref xref)
Removes a value for the 'xref' property.
|
void |
setChemicalFormula(java.lang.String chemicalFormula)
Sets the 'chemicalFormula' property value
|
EntityReferenceTypeVocabulary |
setEntityReferenceType()
Sets the 'entityReferenceType' property value to an anonymous node
|
EntityReferenceTypeVocabulary |
setEntityReferenceType(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'entityReferenceType' property value
|
void |
setEntityReferenceType(EntityReferenceTypeVocabulary entityReferenceType)
Sets the 'entityReferenceType' property value
|
void |
setMolecularWeight(java.lang.Float molecularWeight)
Sets the 'molecularWeight' property value
|
ChemicalStructure |
setStructure()
Sets the 'structure' property value to an anonymous node
|
void |
setStructure(ChemicalStructure structure)
Sets the 'structure' property value
|
ChemicalStructure |
setStructure(com.hp.hpl.jena.rdf.model.Resource resource)
Sets the 'structure' property value
|
void |
unregisterListener(ThingListener listener) |
public java.util.List listStatements()
public void clearCache()
public java.util.Iterator getComment() throws JastorException
UtilityClass
getComment
in interface UtilityClass
Iterator
of String
JastorException
UtilityClass.commentProperty
public void addComment(java.lang.String comment) throws JastorException
UtilityClass
addComment
in interface UtilityClass
JastorException
UtilityClass.commentProperty
public void removeComment(java.lang.String comment) throws JastorException
UtilityClass
removeComment
in interface UtilityClass
JastorException
UtilityClass.commentProperty
public java.util.Iterator getMemberEntityReference() throws JastorException
EntityReference
getMemberEntityReference
in interface EntityReference
Iterator
of EntityReference
JastorException
EntityReference.memberEntityReferenceProperty
public void addMemberEntityReference(EntityReference memberEntityReference) throws JastorException
EntityReference
addMemberEntityReference
in interface EntityReference
JastorException
EntityReference.memberEntityReferenceProperty
public EntityReference addMemberEntityReference() throws JastorException
EntityReference
addMemberEntityReference
in interface EntityReference
EntityReference
createdJastorException
EntityReference.memberEntityReferenceProperty
public EntityReference addMemberEntityReference(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
SmallMoleculeReference
addMemberEntityReference
in interface EntityReference
addMemberEntityReference
in interface SmallMoleculeReference
JastorException
EntityReference.memberEntityReferenceProperty
public void removeMemberEntityReference(EntityReference memberEntityReference) throws JastorException
EntityReference
removeMemberEntityReference
in interface EntityReference
JastorException
EntityReference.memberEntityReferenceProperty
public java.util.Iterator getMemberEntityReference_asSmallMoleculeReference() throws JastorException
SmallMoleculeReference
getMemberEntityReference_asSmallMoleculeReference
in interface SmallMoleculeReference
Iterator
of SmallMoleculeReference
JastorException
EntityReference.memberEntityReferenceProperty
public SmallMoleculeReference addMemberEntityReference_asSmallMoleculeReference() throws JastorException
SmallMoleculeReference
addMemberEntityReference_asSmallMoleculeReference
in interface SmallMoleculeReference
SmallMoleculeReference
createdJastorException
EntityReference.memberEntityReferenceProperty
public SmallMoleculeReference addMemberEntityReference_asSmallMoleculeReference(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
SmallMoleculeReference
SmallMoleculeReference
with the factory
and calling addMemberEntityReference(fr.curie.BiNoM.pathways.biopax.SmallMoleculeReference memberEntityReference)
The resource argument have rdf:type http://www.biopax.org/release/biopax-level3.owl#SmallMoleculeReference. That is, this method
should not be used as a shortcut for creating new objects in the model.addMemberEntityReference_asSmallMoleculeReference
in interface SmallMoleculeReference
JastorException
EntityReference.memberEntityReferenceProperty
public void removeMemberEntityReference(SmallMoleculeReference memberEntityReference) throws JastorException
SmallMoleculeReference
removeMemberEntityReference
in interface SmallMoleculeReference
JastorException
EntityReference.memberEntityReferenceProperty
public EntityReferenceTypeVocabulary getEntityReferenceType() throws JastorException
EntityReference
getEntityReferenceType
in interface EntityReference
EntityReferenceTypeVocabulary
JastorException
EntityReference.entityReferenceTypeProperty
public void setEntityReferenceType(EntityReferenceTypeVocabulary entityReferenceType) throws JastorException
EntityReference
setEntityReferenceType
in interface EntityReference
JastorException
EntityReference.entityReferenceTypeProperty
public EntityReferenceTypeVocabulary setEntityReferenceType() throws JastorException
EntityReference
setEntityReferenceType
in interface EntityReference
EntityReferenceTypeVocabulary
, the created valueJastorException
EntityReference.entityReferenceTypeProperty
public EntityReferenceTypeVocabulary setEntityReferenceType(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
EntityReference
setEntityReferenceType
in interface EntityReference
JastorException
EntityReference.entityReferenceTypeProperty
public java.util.Iterator getEntityFeature() throws JastorException
EntityReference
getEntityFeature
in interface EntityReference
Iterator
of EntityFeature
JastorException
EntityReference.entityFeatureProperty
public void addEntityFeature(EntityFeature entityFeature) throws JastorException
EntityReference
addEntityFeature
in interface EntityReference
JastorException
EntityReference.entityFeatureProperty
public EntityFeature addEntityFeature() throws JastorException
EntityReference
addEntityFeature
in interface EntityReference
EntityFeature
createdJastorException
EntityReference.entityFeatureProperty
public EntityFeature addEntityFeature(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
EntityReference
addEntityFeature
in interface EntityReference
JastorException
EntityReference.entityFeatureProperty
public void removeEntityFeature(EntityFeature entityFeature) throws JastorException
EntityReference
removeEntityFeature
in interface EntityReference
JastorException
EntityReference.entityFeatureProperty
public java.util.Iterator getName() throws JastorException
EntityReference
getName
in interface EntityReference
Iterator
of String
JastorException
EntityReference.nameProperty
public void addName(java.lang.String name) throws JastorException
EntityReference
addName
in interface EntityReference
JastorException
EntityReference.nameProperty
public void removeName(java.lang.String name) throws JastorException
EntityReference
removeName
in interface EntityReference
JastorException
EntityReference.nameProperty
public java.util.Iterator getEvidence() throws JastorException
EntityReference
getEvidence
in interface EntityReference
Iterator
of Evidence
JastorException
EntityReference.evidenceProperty
public void addEvidence(Evidence evidence) throws JastorException
EntityReference
addEvidence
in interface EntityReference
JastorException
EntityReference.evidenceProperty
public Evidence addEvidence() throws JastorException
EntityReference
addEvidence
in interface EntityReference
Evidence
createdJastorException
EntityReference.evidenceProperty
public Evidence addEvidence(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
EntityReference
addEvidence
in interface EntityReference
JastorException
EntityReference.evidenceProperty
public void removeEvidence(Evidence evidence) throws JastorException
EntityReference
removeEvidence
in interface EntityReference
JastorException
EntityReference.evidenceProperty
public java.util.Iterator getXref() throws JastorException
EntityReference
getXref
in interface EntityReference
Iterator
of Xref
JastorException
EntityReference.xrefProperty
public void addXref(Xref xref) throws JastorException
EntityReference
addXref
in interface EntityReference
JastorException
EntityReference.xrefProperty
public Xref addXref() throws JastorException
EntityReference
addXref
in interface EntityReference
Xref
createdJastorException
EntityReference.xrefProperty
public Xref addXref(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
EntityReference
addXref
in interface EntityReference
JastorException
EntityReference.xrefProperty
public void removeXref(Xref xref) throws JastorException
EntityReference
removeXref
in interface EntityReference
JastorException
EntityReference.xrefProperty
public java.lang.String getChemicalFormula() throws JastorException
SmallMoleculeReference
getChemicalFormula
in interface SmallMoleculeReference
String
JastorException
SmallMoleculeReference.chemicalFormulaProperty
public void setChemicalFormula(java.lang.String chemicalFormula) throws JastorException
SmallMoleculeReference
setChemicalFormula
in interface SmallMoleculeReference
JastorException
SmallMoleculeReference.chemicalFormulaProperty
public java.lang.Float getMolecularWeight() throws JastorException
SmallMoleculeReference
getMolecularWeight
in interface SmallMoleculeReference
Float
JastorException
SmallMoleculeReference.molecularWeightProperty
public void setMolecularWeight(java.lang.Float molecularWeight) throws JastorException
SmallMoleculeReference
setMolecularWeight
in interface SmallMoleculeReference
JastorException
SmallMoleculeReference.molecularWeightProperty
public ChemicalStructure getStructure() throws JastorException
SmallMoleculeReference
getStructure
in interface SmallMoleculeReference
ChemicalStructure
JastorException
SmallMoleculeReference.structureProperty
public void setStructure(ChemicalStructure structure) throws JastorException
SmallMoleculeReference
setStructure
in interface SmallMoleculeReference
JastorException
SmallMoleculeReference.structureProperty
public ChemicalStructure setStructure() throws JastorException
SmallMoleculeReference
setStructure
in interface SmallMoleculeReference
ChemicalStructure
, the created valueJastorException
SmallMoleculeReference.structureProperty
public ChemicalStructure setStructure(com.hp.hpl.jena.rdf.model.Resource resource) throws JastorException
SmallMoleculeReference
setStructure
in interface SmallMoleculeReference
JastorException
SmallMoleculeReference.structureProperty
public void registerListener(ThingListener listener)
public void unregisterListener(ThingListener listener)
public void addedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)
public void removedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)