fr.curie.BiNoM.pathways.wrappers
Class CellDesigner

java.lang.Object
  fr.curie.BiNoM.pathways.wrappers.CellDesigner

public class CellDesigner
extends java.lang.Object

Wrapper class for CellDesigner with some utilities implemented

Author:

Andrei Zinovyev

Field Summary

static java.util.HashMap

entities Map from Species Ids to all CellDesigner objects

Constructor Summary

CellDesigner()

Method Summary

static java.util.HashMap	getAllObjectsHash(org.sbml.x2001.ns.celldesigner.SbmlDocument sbmlDoc)
static java.util.HashMap	getEntities(org.sbml.x2001.ns.celldesigner.SbmlDocument sbmlDoc) Fills entities map
static org.sbml.x2001.ns.celldesigner.SbmlDocument	loadCellDesigner(java.lang.String fn) Loads org.sbml.x2001.ns.celldesigner.SbmlDocument from file
static void	saveCellDesigner(org.sbml.x2001.ns.celldesigner.SbmlDocument sbml, java.lang.String fn) Save org.sbml.x2001.ns.celldesigner.SbmlDocument to file

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

entities

public static java.util.HashMap entities

Map from Species Ids to all CellDesigner objects

Constructor Detail

CellDesigner

public CellDesigner()

Method Detail

saveCellDesigner

public static void saveCellDesigner(org.sbml.x2001.ns.celldesigner.SbmlDocument sbml,
                                    java.lang.String fn)

Save org.sbml.x2001.ns.celldesigner.SbmlDocument to file

Parameters:

sbml -

fn -

loadCellDesigner

public static org.sbml.x2001.ns.celldesigner.SbmlDocument loadCellDesigner(java.lang.String fn)

Loads org.sbml.x2001.ns.celldesigner.SbmlDocument from file

Parameters:

fn -

Returns:

getEntities

public static java.util.HashMap getEntities(org.sbml.x2001.ns.celldesigner.SbmlDocument sbmlDoc)

Fills entities map

Parameters:

sbmlDoc -

Returns:

getAllObjectsHash

public static java.util.HashMap getAllObjectsHash(org.sbml.x2001.ns.celldesigner.SbmlDocument sbmlDoc)