fr.curie.BiNoM.pathways.analysis.structure
Class StructureAnalysisUtils.Option

java.lang.Object
  fr.curie.BiNoM.pathways.analysis.structure.StructureAnalysisUtils.Option

Enclosing class:

StructureAnalysisUtils

public static class StructureAnalysisUtils.Option
extends java.lang.Object

Options container

Field Summary

static int	ALL_PATHS
static int	ALL_SHORTEST_PATHS
boolean	directedGraph
float	intersectionThreshold
int	pathFindMode
double	searchRadius
int	smallestCycleSize
static int	SUBOPTIMAL_SHORTEST_PATHS

Constructor Summary

StructureAnalysisUtils.Option()

Method Summary

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

intersectionThreshold

public float intersectionThreshold

smallestCycleSize

public int smallestCycleSize

ALL_SHORTEST_PATHS

public static int ALL_SHORTEST_PATHS

SUBOPTIMAL_SHORTEST_PATHS

public static int SUBOPTIMAL_SHORTEST_PATHS

ALL_PATHS

public static int ALL_PATHS

pathFindMode

public int pathFindMode

directedGraph

public boolean directedGraph

searchRadius

public double searchRadius

Constructor Detail

StructureAnalysisUtils.Option

public StructureAnalysisUtils.Option()