Package fr.curie.BiNoM.pathways.analysis.structure

Tools for structural analysis of biological graphs

See:
Description

Class Summary

Attribute	Simple internal for BiNoM implementation of node and edge attribute
BiographUtils	Set of functions using specific graph node semantics of BiNoM
BipartiteGraph	Was supposed to deal with Bi-partite graphs specifically but has not been used yet
Edge	Simple internal BiNoM implementation of Edge object.
Element	Abstract class for attributed graph elements (Nodes, Edges, HyperEdges, etc.)
Graph
GraphAlgorithms	Implementation of graph algorithms without use of any node or edge semantics
Node
Skeleton	Some old and forgotten idea
StructureAnalysisUtils	Connector class between GraphAlgorithms and BiographUtils and Cytoscape interface
StructureAnalysisUtils.Option	Options container

Package fr.curie.BiNoM.pathways.analysis.structure Description

Tools for structural analysis of biological graphs

Related Documentation

For tutorial and examples and tool documentation, please see:

• BiNoM tool page