fr.curie.BiNoM.pathways.biopax
Interface relationshipXref

All Superinterfaces:

externalReferenceUtilityClass, com.ibm.adtech.jastor.Thing, utilityClass, xref

All Known Implementing Classes:

relationshipXrefImpl

public interface relationshipXref
extends xref, com.ibm.adtech.jastor.Thing

Interface for relationshipXref ontology class
Use the fr.curie.BiNoM.pathways.biopax.biopax_DASH_level2_DOT_owlFactory to create instances of this interface.

(URI: http://www.biopax.org/release/biopax-level2.owl#relationshipXref)

RDF Schema Standard Properties
comment : Definition: An xref that defines a reference to an entity in an external resource that does not have the same biological identity as the referring entity. Comment: There is currently no controlled vocabulary of relationship types for BioPAX, although one will be created in the future if a need develops. Examples: A link between a gene G in a BioPAX data collection, and the protein product P of that gene in an external database. This is not a unification xref because G and P are different biological entities (one is a gene and one is a protein). Another example is a relationship xref for a protein that refers to the Gene Ontology biological process, e.g. 'immune response,' that the protein is involved in.^^http://www.w3.org/2001/XMLSchema#string

Field Summary

static com.hp.hpl.jena.rdf.model.Property	RELATIONSHIP_DASH_TYPEProperty The Jena Property for RELATIONSHIP_DASH_TYPE
static com.hp.hpl.jena.rdf.model.Resource	TYPE The rdf:type for this ontology class

Fields inherited from interface fr.curie.BiNoM.pathways.biopax.xref

DB_DASH_VERSIONProperty, DBProperty, ID_DASH_VERSIONProperty, IDProperty

Fields inherited from interface fr.curie.BiNoM.pathways.biopax.utilityClass

COMMENTProperty

Fields inherited from interface com.ibm.adtech.jastor.Thing

copyright

Method Summary

java.lang.String	getRELATIONSHIP_DASH_TYPE() Gets the 'RELATIONSHIP_DASH_TYPE' property value
void	setRELATIONSHIP_DASH_TYPE(java.lang.String RELATIONSHIP_DASH_TYPE) Sets the 'RELATIONSHIP_DASH_TYPE' property value

Methods inherited from interface fr.curie.BiNoM.pathways.biopax.xref

getDB_DASH_VERSION, getDB, getID_DASH_VERSION, getID, setDB_DASH_VERSION, setDB, setID_DASH_VERSION, setID

Methods inherited from interface fr.curie.BiNoM.pathways.biopax.utilityClass

addCOMMENT, getCOMMENT, removeCOMMENT

Methods inherited from interface com.ibm.adtech.jastor.Thing

clearCache, isRDFType, listStatements, model, registerListener, removeStatements, resource, unregisterListener, uri

Field Detail

TYPE

static final com.hp.hpl.jena.rdf.model.Resource TYPE

The rdf:type for this ontology class

RELATIONSHIP_DASH_TYPEProperty

static final com.hp.hpl.jena.rdf.model.Property RELATIONSHIP_DASH_TYPEProperty

The Jena Property for RELATIONSHIP_DASH_TYPE

(URI: http://www.biopax.org/release/biopax-level2.owl#RELATIONSHIP-TYPE)

RDF Schema Standard Properties
comment : This property names the type of relationship between the BioPAX object linked from, and the external object linked to, such as 'gene of this protein', or 'protein with similar sequence'.^^http://www.w3.org/2001/XMLSchema#string

Method Detail

getRELATIONSHIP_DASH_TYPE

java.lang.String getRELATIONSHIP_DASH_TYPE()
                                           throws com.ibm.adtech.jastor.JastorException

Gets the 'RELATIONSHIP_DASH_TYPE' property value

Returns:

String

Throws:

com.ibm.adtech.jastor.JastorException

See Also:

RELATIONSHIP_DASH_TYPEProperty

setRELATIONSHIP_DASH_TYPE

void setRELATIONSHIP_DASH_TYPE(java.lang.String RELATIONSHIP_DASH_TYPE)
                               throws com.ibm.adtech.jastor.JastorException

Sets the 'RELATIONSHIP_DASH_TYPE' property value

Parameters:

{@link - java.lang.String}

Throws:

com.ibm.adtech.jastor.JastorException

See Also:

RELATIONSHIP_DASH_TYPEProperty