fr.curie.BiNoM.pathways.biopax
Interface utilityClass

All Superinterfaces:

com.ibm.adtech.jastor.Thing

All Known Subinterfaces:

bioSource, chemicalStructure, confidence, dataSource, deltaGprimeO, evidence, experimentalForm, externalReferenceUtilityClass, kPrime, openControlledVocabulary, pathwayStep, physicalEntityParticipant, publicationXref, relationshipXref, sequenceFeature, sequenceInterval, sequenceLocation, sequenceParticipant, sequenceSite, unificationXref, xref

All Known Implementing Classes:

bioSourceImpl, chemicalStructureImpl, confidenceImpl, dataSourceImpl, deltaGprimeOImpl, evidenceImpl, experimentalFormImpl, externalReferenceUtilityClassImpl, kPrimeImpl, openControlledVocabularyImpl, pathwayStepImpl, physicalEntityParticipantImpl, publicationXrefImpl, relationshipXrefImpl, sequenceFeatureImpl, sequenceIntervalImpl, sequenceLocationImpl, sequenceParticipantImpl, sequenceSiteImpl, unificationXrefImpl, utilityClassImpl, xrefImpl

public interface utilityClass
extends com.ibm.adtech.jastor.Thing

Interface for utilityClass ontology class
Use the fr.curie.BiNoM.pathways.biopax.biopax_DASH_level2_DOT_owlFactory to create instances of this interface.

(URI: http://www.biopax.org/release/biopax-level2.owl#utilityClass)

RDF Schema Standard Properties
comment : Definition: Utility classes are created when simple slots are insufficient to describe an aspect of an entity or to increase compatibility of this ontology with other standards. The utilityClass class is actually a metaclass and is only present to organize the other helper classes under one class hierarchy; instances of utilityClass should never be created.^^http://www.w3.org/2001/XMLSchema#string

Field Summary

static com.hp.hpl.jena.rdf.model.Property	COMMENTProperty The Jena Property for COMMENT
static com.hp.hpl.jena.rdf.model.Resource	TYPE The rdf:type for this ontology class

Fields inherited from interface com.ibm.adtech.jastor.Thing

copyright

Method Summary

void	addCOMMENT(java.lang.String COMMENT) Add a 'COMMENT' property value
java.util.Iterator	getCOMMENT() Iterates through the 'COMMENT' property values.
void	removeCOMMENT(java.lang.String COMMENT) Remove a 'COMMENT' property value.

Methods inherited from interface com.ibm.adtech.jastor.Thing

clearCache, isRDFType, listStatements, model, registerListener, removeStatements, resource, unregisterListener, uri

Field Detail

TYPE

static final com.hp.hpl.jena.rdf.model.Resource TYPE

The rdf:type for this ontology class

COMMENTProperty

static final com.hp.hpl.jena.rdf.model.Property COMMENTProperty

The Jena Property for COMMENT

(URI: http://www.biopax.org/release/biopax-level2.owl#COMMENT)

RDF Schema Standard Properties
comment : Comment on the data in the container class. This property should be used instead of the OWL documentation elements (rdfs:comment) for instances because information in COMMENT is data to be exchanged, whereas the rdfs:comment field is used for metadata about the structure of the BioPAX ontology.^^http://www.w3.org/2001/XMLSchema#string

Method Detail

getCOMMENT

java.util.Iterator getCOMMENT()
                              throws com.ibm.adtech.jastor.JastorException

Iterates through the 'COMMENT' property values. This Iteartor may be used to remove all such values.

Returns:

Iterator of String

Throws:

com.ibm.adtech.jastor.JastorException

See Also:

COMMENTProperty

addCOMMENT

void addCOMMENT(java.lang.String COMMENT)
                throws com.ibm.adtech.jastor.JastorException

Add a 'COMMENT' property value

Parameters:

{@link - java.lang.String}, the value to add

Throws:

com.ibm.adtech.jastor.JastorException

See Also:

COMMENTProperty

removeCOMMENT

void removeCOMMENT(java.lang.String COMMENT)
                   throws com.ibm.adtech.jastor.JastorException

Remove a 'COMMENT' property value. This method should not be invoked while iterator through values. In that case, the remove() method of the Iterator itself should be used.

Parameters:

{@link - java.lang.String}, the value to remove

Throws:

com.ibm.adtech.jastor.JastorException

See Also:

COMMENTProperty