Uses of Class
fr.curie.BiNoM.pathways.BioPAXToSBMLConverter

Packages that use BioPAXToSBMLConverter

fr.curie.BiNoM.pathways	Set of converters for conversion of one systems biology format into an other.
fr.curie.BiNoM.pathways.utils	Utility classes

Uses of BioPAXToSBMLConverter in fr.curie.BiNoM.pathways

Subclasses of BioPAXToSBMLConverter in fr.curie.BiNoM.pathways

class	BioPAXToCytoscapeConverter Converts BioPAX (represented by BioPAX object) to XGMML (represented by GraphDocument object)
class	parseBioPAX Utility class for listing some BioPAX information as a readable text

Methods in fr.curie.BiNoM.pathways with parameters of type BioPAXToSBMLConverter

static void

CytoscapeToBioPAXConverter.removeConversion(conversion br, java.util.HashMap participants, java.util.HashMap allparticipants, java.util.Vector reactions, java.util.HashMap interactions, BioPAXToSBMLConverter b2s)

Uses of BioPAXToSBMLConverter in fr.curie.BiNoM.pathways.utils

Fields in fr.curie.BiNoM.pathways.utils declared as BioPAXToSBMLConverter

BioPAXToSBMLConverter

BioPAXGraphMapper.bsc BioPAXToSBML Converter is needed to created the Reaction Network part of the index