Package fr.curie.BiNoM.pathways.utils

Utility classes

See:
Description

Class Summary

AccessionNumberTable	Class for conversion from some accession numbers and names to the id- and namespace used by a database
analyseInstallSpyLog
BioPAXGraphMapper	Creates a BioPAX index - mapping of BioPAX content onto an attributed (di)graph
BioPAXGraphMappingService	Service class performing creating BioPAX index
BioPAXGraphQuery	A simple container of the BioPAX standard query
BioPAXGraphQueryEngine	The actual implementation of the standard query
BioPAXMerge	Utilities for merging BioPAX objects
BioPAXNamingService	BioPAX Naming Service.
BioPAXUtilities	Set of utilities for manipulating com.hp.hpl.jena.rdf.model.Model objects
GraphXGMMLParser	Simple XGMML parser
insertMassActionLaws
LaplaceMatToSif
PowerfulTokenizer	A Powerful Tokenizer Author Bhabani Padhi Extension of the standard StringTokenizer
prepareCellDesignerFile
SimpleTable	Simple implementation of a table of entries
Utils	Set of simple functions
XGMMLExport	deprecated

Package fr.curie.BiNoM.pathways.utils Description

Utility classes

Related Documentation

For tutorial and examples and tool documentation, please see:

• BiNoM tool page