Uses of Interface
fr.curie.BiNoM.pathways.biopax.catalysis

Packages that use catalysis

fr.curie.BiNoM.pathways.biopax

Java mapping of BioPAX version 2 (generated by Jastor)

Uses of catalysis in fr.curie.BiNoM.pathways.biopax

Classes in fr.curie.BiNoM.pathways.biopax that implement catalysis

class

catalysisImpl Implementation of catalysis Use the fr.curie.BiNoM.pathways.biopax.biopax_DASH_level2_DOT_owlFactory to create instances of this class.

Methods in fr.curie.BiNoM.pathways.biopax that return catalysis

static catalysis	biopax_DASH_level2_DOT_owlFactory.createcatalysis(com.hp.hpl.jena.rdf.model.Resource resource, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of catalysis.
static catalysis	biopax_DASH_level2_DOT_owlFactory.createcatalysis(java.lang.String uri, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of catalysis.
static catalysis	biopax_DASH_level2_DOT_owlFactory.getcatalysis(com.hp.hpl.jena.rdf.model.Resource resource, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of catalysis.
static catalysis	biopax_DASH_level2_DOT_owlFactory.getcatalysis(java.lang.String uri, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of catalysis.
catalysis	modulationImpl.getCONTROLLED_ascatalysis()
catalysis	modulation.getCONTROLLED_ascatalysis() Gets the 'CONTROLLED' property value
catalysis	modulationImpl.setCONTROLLED_ascatalysis()
catalysis	modulation.setCONTROLLED_ascatalysis() Sets the 'CONTROLLED' property value to an anonymous node
catalysis	modulationImpl.setCONTROLLED_ascatalysis(com.hp.hpl.jena.rdf.model.Resource resource)
catalysis	modulation.setCONTROLLED_ascatalysis(com.hp.hpl.jena.rdf.model.Resource resource) Sets the 'CONTROLLED' property value to the given resource, and add's rdf:type properties.

Methods in fr.curie.BiNoM.pathways.biopax with parameters of type catalysis

void	catalysisListener.AVAILABILITYAdded(catalysis source, java.lang.String newValue) Called when a value of AVAILABILITY has been added
void	catalysisListener.AVAILABILITYRemoved(catalysis source, java.lang.String oldValue) Called when a value of AVAILABILITY has been removed
void	catalysisListener.COFACTORAdded(catalysis source, physicalEntityParticipant newValue) Called when a value of COFACTOR has been added
void	catalysisListener.COFACTORRemoved(catalysis source, physicalEntityParticipant oldValue) Called when a value of COFACTOR has been removed
void	catalysisListener.COMMENTAdded(catalysis source, java.lang.String newValue) Called when a value of COMMENT has been added
void	catalysisListener.COMMENTRemoved(catalysis source, java.lang.String oldValue) Called when a value of COMMENT has been removed
void	catalysisListener.CONTROL_DASH_TYPEChanged(catalysis source) Called when CONTROL_DASH_TYPE has changed
void	catalysisListener.CONTROLLEDChanged(catalysis source) Called when CONTROLLED has changed
void	catalysisListener.CONTROLLERChanged(catalysis source) Called when CONTROLLER has changed
void	catalysisListener.DATA_DASH_SOURCEAdded(catalysis source, dataSource newValue) Called when a value of DATA_DASH_SOURCE has been added
void	catalysisListener.DATA_DASH_SOURCERemoved(catalysis source, dataSource oldValue) Called when a value of DATA_DASH_SOURCE has been removed
void	catalysisListener.DIRECTIONChanged(catalysis source) Called when DIRECTION has changed
void	catalysisListener.EVIDENCEAdded(catalysis source, evidence newValue) Called when a value of EVIDENCE has been added
void	catalysisListener.EVIDENCERemoved(catalysis source, evidence oldValue) Called when a value of EVIDENCE has been removed
void	catalysisListener.INTERACTION_DASH_TYPEAdded(catalysis source, openControlledVocabulary newValue) Called when a value of INTERACTION_DASH_TYPE has been added
void	catalysisListener.INTERACTION_DASH_TYPERemoved(catalysis source, openControlledVocabulary oldValue) Called when a value of INTERACTION_DASH_TYPE has been removed
void	catalysisListener.NAMEChanged(catalysis source) Called when NAME has changed
void	catalysisListener.PARTICIPANTSAdded(catalysis source, entity newValue) Called when a value of PARTICIPANTS has been added
void	catalysisListener.PARTICIPANTSAdded(catalysis source, physicalEntityParticipant newValue) Called when a value of PARTICIPANTS has been added
void	catalysisListener.PARTICIPANTSRemoved(catalysis source, entity oldValue) Called when a value of PARTICIPANTS has been removed
void	catalysisListener.PARTICIPANTSRemoved(catalysis source, physicalEntityParticipant oldValue) Called when a value of PARTICIPANTS has been removed
void	modulationImpl.setCONTROLLED(catalysis CONTROLLED)
void	modulation.setCONTROLLED(catalysis CONTROLLED) Sets the 'CONTROLLED' property value
void	catalysisListener.SHORT_DASH_NAMEChanged(catalysis source) Called when SHORT_DASH_NAME has changed
void	catalysisListener.SYNONYMSAdded(catalysis source, java.lang.String newValue) Called when a value of SYNONYMS has been added
void	catalysisListener.SYNONYMSRemoved(catalysis source, java.lang.String oldValue) Called when a value of SYNONYMS has been removed
void	catalysisListener.XREFAdded(catalysis source, xref newValue) Called when a value of XREF has been added
void	catalysisListener.XREFRemoved(catalysis source, xref oldValue) Called when a value of XREF has been removed