fr.curie.BiNoM.pathways.biopax
Class evidenceImpl

java.lang.Object
  extended by com.hp.hpl.jena.rdf.listeners.StatementListener
      extended by com.ibm.adtech.jastor.ThingImpl
          extended by fr.curie.BiNoM.pathways.biopax.evidenceImpl
All Implemented Interfaces:
com.hp.hpl.jena.rdf.model.ModelChangedListener, com.ibm.adtech.jastor.Thing, evidence, utilityClass

public class evidenceImpl
extends com.ibm.adtech.jastor.ThingImpl
implements evidence

Implementation of evidence Use the fr.curie.BiNoM.pathways.biopax.biopax_DASH_level2_DOT_owlFactory to create instances of this class.

(URI: http://www.biopax.org/release/biopax-level2.owl#evidence)



Field Summary
 
Fields inherited from class com.ibm.adtech.jastor.ThingImpl
copyright
 
Fields inherited from interface fr.curie.BiNoM.pathways.biopax.evidence
TYPE
 
Fields inherited from interface com.ibm.adtech.jastor.Thing
copyright
 
Method Summary
 void addCOMMENT(java.lang.String COMMENT)
          Add a 'COMMENT' property value
 confidence addCONFIDENCE()
          Adds an anonymous value for the 'CONFIDENCE' property
 void addCONFIDENCE(confidence CONFIDENCE)
          Adds a value for the 'CONFIDENCE' property
 confidence addCONFIDENCE(com.hp.hpl.jena.rdf.model.Resource resource)
          Adds a value for the 'CONFIDENCE' property.
 void addedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)
           
 openControlledVocabulary addEVIDENCE_DASH_CODE()
          Adds an anonymous value for the 'EVIDENCE_DASH_CODE' property
 void addEVIDENCE_DASH_CODE(openControlledVocabulary EVIDENCE_DASH_CODE)
          Adds a value for the 'EVIDENCE_DASH_CODE' property
 openControlledVocabulary addEVIDENCE_DASH_CODE(com.hp.hpl.jena.rdf.model.Resource resource)
          Adds a value for the 'EVIDENCE_DASH_CODE' property.
 experimentalForm addEXPERIMENTAL_DASH_FORM()
          Adds an anonymous value for the 'EXPERIMENTAL_DASH_FORM' property
 void addEXPERIMENTAL_DASH_FORM(experimentalForm EXPERIMENTAL_DASH_FORM)
          Adds a value for the 'EXPERIMENTAL_DASH_FORM' property
 experimentalForm addEXPERIMENTAL_DASH_FORM(com.hp.hpl.jena.rdf.model.Resource resource)
          Adds a value for the 'EXPERIMENTAL_DASH_FORM' property.
 xref addXREF()
          Adds an anonymous value for the 'XREF' property
 xref addXREF(com.hp.hpl.jena.rdf.model.Resource resource)
          Adds a value for the 'XREF' property.
 void addXREF(xref XREF)
          Adds a value for the 'XREF' property
 void clearCache()
           
 java.util.Iterator getCOMMENT()
          Iterates through the 'COMMENT' property values.
 java.util.Iterator getCONFIDENCE()
          Get an Iterator the 'CONFIDENCE' property values.
 java.util.Iterator getEVIDENCE_DASH_CODE()
          Get an Iterator the 'EVIDENCE_DASH_CODE' property values.
 java.util.Iterator getEXPERIMENTAL_DASH_FORM()
          Get an Iterator the 'EXPERIMENTAL_DASH_FORM' property values.
 java.util.Iterator getXREF()
          Get an Iterator the 'XREF' property values.
 java.util.List listStatements()
           
 void registerListener(com.ibm.adtech.jastor.ThingListener listener)
           
 void removeCOMMENT(java.lang.String COMMENT)
          Remove a 'COMMENT' property value.
 void removeCONFIDENCE(confidence CONFIDENCE)
          Removes a value for the 'CONFIDENCE' property.
 void removedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)
           
 void removeEVIDENCE_DASH_CODE(openControlledVocabulary EVIDENCE_DASH_CODE)
          Removes a value for the 'EVIDENCE_DASH_CODE' property.
 void removeEXPERIMENTAL_DASH_FORM(experimentalForm EXPERIMENTAL_DASH_FORM)
          Removes a value for the 'EXPERIMENTAL_DASH_FORM' property.
 void removeXREF(xref XREF)
          Removes a value for the 'XREF' property.
 void unregisterListener(com.ibm.adtech.jastor.ThingListener listener)
           
 
Methods inherited from class com.ibm.adtech.jastor.ThingImpl
equals, isRDFType, model, removeStatements, resource, toString, uri
 
Methods inherited from class com.hp.hpl.jena.rdf.listeners.StatementListener
addedStatements, addedStatements, addedStatements, addedStatements, notifyEvent, removedStatements, removedStatements, removedStatements, removedStatements
 
Methods inherited from class java.lang.Object
getClass, hashCode, notify, notifyAll, wait, wait, wait
 
Methods inherited from interface com.ibm.adtech.jastor.Thing
isRDFType, model, removeStatements, resource, uri
 

Method Detail

listStatements

public java.util.List listStatements()
Specified by:
listStatements in interface com.ibm.adtech.jastor.Thing
Overrides:
listStatements in class com.ibm.adtech.jastor.ThingImpl

clearCache

public void clearCache()
Specified by:
clearCache in interface com.ibm.adtech.jastor.Thing
Overrides:
clearCache in class com.ibm.adtech.jastor.ThingImpl

getCOMMENT

public java.util.Iterator getCOMMENT()
                              throws com.ibm.adtech.jastor.JastorException
Description copied from interface: utilityClass
Iterates through the 'COMMENT' property values. This Iteartor may be used to remove all such values.

Specified by:
getCOMMENT in interface utilityClass
Returns:
Iterator of String
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
utilityClass.COMMENTProperty

addCOMMENT

public void addCOMMENT(java.lang.String COMMENT)
                throws com.ibm.adtech.jastor.JastorException
Description copied from interface: utilityClass
Add a 'COMMENT' property value

Specified by:
addCOMMENT in interface utilityClass
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
utilityClass.COMMENTProperty

removeCOMMENT

public void removeCOMMENT(java.lang.String COMMENT)
                   throws com.ibm.adtech.jastor.JastorException
Description copied from interface: utilityClass
Remove a 'COMMENT' property value. This method should not be invoked while iterator through values. In that case, the remove() method of the Iterator itself should be used.

Specified by:
removeCOMMENT in interface utilityClass
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
utilityClass.COMMENTProperty

getEXPERIMENTAL_DASH_FORM

public java.util.Iterator getEXPERIMENTAL_DASH_FORM()
                                             throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Get an Iterator the 'EXPERIMENTAL_DASH_FORM' property values. This Iteartor may be used to remove all such values.

Specified by:
getEXPERIMENTAL_DASH_FORM in interface evidence
Returns:
Iterator of experimentalForm
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EXPERIMENTAL_DASH_FORMProperty

addEXPERIMENTAL_DASH_FORM

public void addEXPERIMENTAL_DASH_FORM(experimentalForm EXPERIMENTAL_DASH_FORM)
                               throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'EXPERIMENTAL_DASH_FORM' property

Specified by:
addEXPERIMENTAL_DASH_FORM in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EXPERIMENTAL_DASH_FORMProperty

addEXPERIMENTAL_DASH_FORM

public experimentalForm addEXPERIMENTAL_DASH_FORM()
                                           throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds an anonymous value for the 'EXPERIMENTAL_DASH_FORM' property

Specified by:
addEXPERIMENTAL_DASH_FORM in interface evidence
Returns:
The anoymous experimentalForm created
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EXPERIMENTAL_DASH_FORMProperty

addEXPERIMENTAL_DASH_FORM

public experimentalForm addEXPERIMENTAL_DASH_FORM(com.hp.hpl.jena.rdf.model.Resource resource)
                                           throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'EXPERIMENTAL_DASH_FORM' property. This method is equivalent constructing a new instance of experimentalForm with the factory and calling addEXPERIMENTAL_DASH_FORM(fr.curie.BiNoM.pathways.biopax.experimentalForm EXPERIMENTAL_DASH_FORM) The resource argument have rdf:type http://www.biopax.org/release/biopax-level2.owl#experimentalForm. That is, this method should not be used as a shortcut for creating new objects in the model.

Specified by:
addEXPERIMENTAL_DASH_FORM in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EXPERIMENTAL_DASH_FORMProperty

removeEXPERIMENTAL_DASH_FORM

public void removeEXPERIMENTAL_DASH_FORM(experimentalForm EXPERIMENTAL_DASH_FORM)
                                  throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Removes a value for the 'EXPERIMENTAL_DASH_FORM' property. This method should not be invoked while iterator through values. In that case, the remove() method of the Iterator itself should be used.

Specified by:
removeEXPERIMENTAL_DASH_FORM in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EXPERIMENTAL_DASH_FORMProperty

getEVIDENCE_DASH_CODE

public java.util.Iterator getEVIDENCE_DASH_CODE()
                                         throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Get an Iterator the 'EVIDENCE_DASH_CODE' property values. This Iteartor may be used to remove all such values.

Specified by:
getEVIDENCE_DASH_CODE in interface evidence
Returns:
Iterator of openControlledVocabulary
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EVIDENCE_DASH_CODEProperty

addEVIDENCE_DASH_CODE

public void addEVIDENCE_DASH_CODE(openControlledVocabulary EVIDENCE_DASH_CODE)
                           throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'EVIDENCE_DASH_CODE' property

Specified by:
addEVIDENCE_DASH_CODE in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EVIDENCE_DASH_CODEProperty

addEVIDENCE_DASH_CODE

public openControlledVocabulary addEVIDENCE_DASH_CODE()
                                               throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds an anonymous value for the 'EVIDENCE_DASH_CODE' property

Specified by:
addEVIDENCE_DASH_CODE in interface evidence
Returns:
The anoymous openControlledVocabulary created
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EVIDENCE_DASH_CODEProperty

addEVIDENCE_DASH_CODE

public openControlledVocabulary addEVIDENCE_DASH_CODE(com.hp.hpl.jena.rdf.model.Resource resource)
                                               throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'EVIDENCE_DASH_CODE' property. This method is equivalent constructing a new instance of openControlledVocabulary with the factory and calling addEVIDENCE_DASH_CODE(fr.curie.BiNoM.pathways.biopax.openControlledVocabulary EVIDENCE_DASH_CODE) The resource argument have rdf:type http://www.biopax.org/release/biopax-level2.owl#openControlledVocabulary. That is, this method should not be used as a shortcut for creating new objects in the model.

Specified by:
addEVIDENCE_DASH_CODE in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EVIDENCE_DASH_CODEProperty

removeEVIDENCE_DASH_CODE

public void removeEVIDENCE_DASH_CODE(openControlledVocabulary EVIDENCE_DASH_CODE)
                              throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Removes a value for the 'EVIDENCE_DASH_CODE' property. This method should not be invoked while iterator through values. In that case, the remove() method of the Iterator itself should be used.

Specified by:
removeEVIDENCE_DASH_CODE in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.EVIDENCE_DASH_CODEProperty

getCONFIDENCE

public java.util.Iterator getCONFIDENCE()
                                 throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Get an Iterator the 'CONFIDENCE' property values. This Iteartor may be used to remove all such values.

Specified by:
getCONFIDENCE in interface evidence
Returns:
Iterator of confidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.CONFIDENCEProperty

addCONFIDENCE

public void addCONFIDENCE(confidence CONFIDENCE)
                   throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'CONFIDENCE' property

Specified by:
addCONFIDENCE in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.CONFIDENCEProperty

addCONFIDENCE

public confidence addCONFIDENCE()
                         throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds an anonymous value for the 'CONFIDENCE' property

Specified by:
addCONFIDENCE in interface evidence
Returns:
The anoymous confidence created
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.CONFIDENCEProperty

addCONFIDENCE

public confidence addCONFIDENCE(com.hp.hpl.jena.rdf.model.Resource resource)
                         throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'CONFIDENCE' property. This method is equivalent constructing a new instance of confidence with the factory and calling addCONFIDENCE(fr.curie.BiNoM.pathways.biopax.confidence CONFIDENCE) The resource argument have rdf:type http://www.biopax.org/release/biopax-level2.owl#confidence. That is, this method should not be used as a shortcut for creating new objects in the model.

Specified by:
addCONFIDENCE in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.CONFIDENCEProperty

removeCONFIDENCE

public void removeCONFIDENCE(confidence CONFIDENCE)
                      throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Removes a value for the 'CONFIDENCE' property. This method should not be invoked while iterator through values. In that case, the remove() method of the Iterator itself should be used.

Specified by:
removeCONFIDENCE in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.CONFIDENCEProperty

getXREF

public java.util.Iterator getXREF()
                           throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Get an Iterator the 'XREF' property values. This Iteartor may be used to remove all such values.

Specified by:
getXREF in interface evidence
Returns:
Iterator of xref
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.XREFProperty

addXREF

public void addXREF(xref XREF)
             throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'XREF' property

Specified by:
addXREF in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.XREFProperty

addXREF

public xref addXREF()
             throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds an anonymous value for the 'XREF' property

Specified by:
addXREF in interface evidence
Returns:
The anoymous xref created
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.XREFProperty

addXREF

public xref addXREF(com.hp.hpl.jena.rdf.model.Resource resource)
             throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Adds a value for the 'XREF' property. This method is equivalent constructing a new instance of xref with the factory and calling addXREF(fr.curie.BiNoM.pathways.biopax.xref XREF) The resource argument have rdf:type http://www.biopax.org/release/biopax-level2.owl#xref. That is, this method should not be used as a shortcut for creating new objects in the model.

Specified by:
addXREF in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.XREFProperty

removeXREF

public void removeXREF(xref XREF)
                throws com.ibm.adtech.jastor.JastorException
Description copied from interface: evidence
Removes a value for the 'XREF' property. This method should not be invoked while iterator through values. In that case, the remove() method of the Iterator itself should be used.

Specified by:
removeXREF in interface evidence
Throws:
com.ibm.adtech.jastor.JastorException
See Also:
evidence.XREFProperty

registerListener

public void registerListener(com.ibm.adtech.jastor.ThingListener listener)
Specified by:
registerListener in interface com.ibm.adtech.jastor.Thing
Overrides:
registerListener in class com.ibm.adtech.jastor.ThingImpl

unregisterListener

public void unregisterListener(com.ibm.adtech.jastor.ThingListener listener)
Specified by:
unregisterListener in interface com.ibm.adtech.jastor.Thing
Overrides:
unregisterListener in class com.ibm.adtech.jastor.ThingImpl

addedStatement

public void addedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)
Specified by:
addedStatement in interface com.hp.hpl.jena.rdf.model.ModelChangedListener
Overrides:
addedStatement in class com.hp.hpl.jena.rdf.listeners.StatementListener

removedStatement

public void removedStatement(com.hp.hpl.jena.rdf.model.Statement stmt)
Specified by:
removedStatement in interface com.hp.hpl.jena.rdf.model.ModelChangedListener
Overrides:
removedStatement in class com.hp.hpl.jena.rdf.listeners.StatementListener