Uses of Interface
fr.curie.BiNoM.pathways.biopax.complex

Packages that use complex

fr.curie.BiNoM.pathways.biopax	Java mapping of BioPAX version 2 (generated by Jastor)
fr.curie.BiNoM.pathways.utils	Utility classes

Uses of complex in fr.curie.BiNoM.pathways.biopax

Classes in fr.curie.BiNoM.pathways.biopax that implement complex

class

complexImpl Implementation of complex Use the fr.curie.BiNoM.pathways.biopax.biopax_DASH_level2_DOT_owlFactory to create instances of this class.

Methods in fr.curie.BiNoM.pathways.biopax that return complex

static complex	biopax_DASH_level2_DOT_owlFactory.createcomplex(com.hp.hpl.jena.rdf.model.Resource resource, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of complex.
static complex	biopax_DASH_level2_DOT_owlFactory.createcomplex(java.lang.String uri, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of complex.
static complex	biopax_DASH_level2_DOT_owlFactory.getcomplex(com.hp.hpl.jena.rdf.model.Resource resource, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of complex.
static complex	biopax_DASH_level2_DOT_owlFactory.getcomplex(java.lang.String uri, com.hp.hpl.jena.rdf.model.Model model) Create a new instance of complex.

Methods in fr.curie.BiNoM.pathways.biopax with parameters of type complex

void	complexListener.AVAILABILITYAdded(complex source, java.lang.String newValue) Called when a value of AVAILABILITY has been added
void	complexListener.AVAILABILITYRemoved(complex source, java.lang.String oldValue) Called when a value of AVAILABILITY has been removed
void	complexListener.COMMENTAdded(complex source, java.lang.String newValue) Called when a value of COMMENT has been added
void	complexListener.COMMENTRemoved(complex source, java.lang.String oldValue) Called when a value of COMMENT has been removed
void	complexListener.COMPONENTSAdded(complex source, physicalEntityParticipant newValue) Called when a value of COMPONENTS has been added
void	complexListener.COMPONENTSRemoved(complex source, physicalEntityParticipant oldValue) Called when a value of COMPONENTS has been removed
void	complexListener.DATA_DASH_SOURCEAdded(complex source, dataSource newValue) Called when a value of DATA_DASH_SOURCE has been added
void	complexListener.DATA_DASH_SOURCERemoved(complex source, dataSource oldValue) Called when a value of DATA_DASH_SOURCE has been removed
void	complexListener.NAMEChanged(complex source) Called when NAME has changed
void	complexListener.ORGANISMAdded(complex source, bioSource newValue) Called when a value of ORGANISM has been added
void	complexListener.ORGANISMRemoved(complex source, bioSource oldValue) Called when a value of ORGANISM has been removed
void	complexListener.SHORT_DASH_NAMEChanged(complex source) Called when SHORT_DASH_NAME has changed
void	complexListener.SYNONYMSAdded(complex source, java.lang.String newValue) Called when a value of SYNONYMS has been added
void	complexListener.SYNONYMSRemoved(complex source, java.lang.String oldValue) Called when a value of SYNONYMS has been removed
void	complexListener.XREFAdded(complex source, xref newValue) Called when a value of XREF has been added
void	complexListener.XREFRemoved(complex source, xref oldValue) Called when a value of XREF has been removed

Uses of complex in fr.curie.BiNoM.pathways.utils

Methods in fr.curie.BiNoM.pathways.utils with parameters of type complex

java.lang.String

BioPAXNamingService.createNameForComplex(complex compl) Generates a name for complex object