Hierarchy For All Packages

Package Hierarchies:

fr.curie.BiNoM.cytoscape.analysis, fr.curie.BiNoM.cytoscape.biopax, fr.curie.BiNoM.cytoscape.biopax.propedit, fr.curie.BiNoM.cytoscape.biopax.query, fr.curie.BiNoM.cytoscape.celldesigner, fr.curie.BiNoM.cytoscape.lib, fr.curie.BiNoM.cytoscape.netwop, fr.curie.BiNoM.cytoscape.plugin, fr.curie.BiNoM.cytoscape.sbml, fr.curie.BiNoM.cytoscape.utils, fr.curie.BiNoM.pathways, fr.curie.BiNoM.pathways.analysis.structure, fr.curie.BiNoM.pathways.biopax, fr.curie.BiNoM.pathways.converters, fr.curie.BiNoM.pathways.test, fr.curie.BiNoM.pathways.test.examples, fr.curie.BiNoM.pathways.utils, fr.curie.BiNoM.pathways.wrappers

Class Hierarchy

• java.lang.Object
  • fr.curie.BiNoM.pathways.utils.AccessionNumberTable
  • fr.curie.BiNoM.pathways.utils.analyseInstallSpyLog
  • fr.curie.BiNoM.pathways.test.analyzeSBMLFile
  • fr.curie.BiNoM.pathways.analysis.structure.Attribute
  • fr.curie.BiNoM.pathways.wrappers.BioPAX
  • fr.curie.BiNoM.pathways.converters.BioPAX2SBML
    • fr.curie.BiNoM.pathways.converters.BioPAX2Cytoscape
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXAssociateSource (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXAssociateSourceTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXDoubleAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXDoubleListAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXIntegerAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXIntegerListAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXObjectAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXObjectListAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXStringAttrDesc
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXStringListAttrDesc
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXClassDesc
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXClassDesc.HierarchyScanner
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXClassDescFactory
  • fr.curie.BiNoM.pathways.test.examples.BioPAXConnectedComponents
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXDisplayIndexInfo (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXExport (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXExportTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXExportToFile (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXGenerateIndex (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXGenerateIndexTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.utils.BioPAXGraphMapper
  • fr.curie.BiNoM.pathways.utils.BioPAXGraphMappingService
  • fr.curie.BiNoM.pathways.utils.BioPAXGraphQuery
  • fr.curie.BiNoM.pathways.utils.BioPAXGraphQueryEngine
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXImport (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXImportFromFile (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXImportFromURL (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXImportTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXIndexPathAnalysis (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXLoadIndex (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXLoadIndexTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.utils.BioPAXMerge
  • fr.curie.BiNoM.pathways.utils.BioPAXNamingService
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXNamingServiceManager
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXObject
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXObjectFactory
  • fr.curie.BiNoM.pathways.test.examples.BioPAXPathAnalysis
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXPropertyManager
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXClassTree (implements java.awt.event.ActionListener)
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXPropertyBrowser (implements java.awt.event.ActionListener)
    • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXPropertyEditor (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXRepository
    • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXDBRepository
    • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXIndexRepository
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXSaveAssociated (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXSelectEntities (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXSelectEntitiesTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXSourceDB
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXStandardQuery (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.pathways.test.examples.BioPAXStandardQuery
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXStandardQueryTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXStandardQueryTask.StandardQueryOptions
  • fr.curie.BiNoM.cytoscape.biopax.BioPAXSyncNetworks (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.pathways.BioPAXToCytoscapeConverter.Graph
  • fr.curie.BiNoM.pathways.BioPAXToCytoscapeConverter.Option
  • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXToggleNamingService (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.pathways.BioPAXToSBMLConverter
    • fr.curie.BiNoM.pathways.BioPAXToCytoscapeConverter
    • fr.curie.BiNoM.pathways.parseBioPAX
  • fr.curie.BiNoM.pathways.BioPAXToSBMLConverter.BioPAXSpecies
  • fr.curie.BiNoM.pathways.utils.BioPAXUtilities
  • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXViewQueryLog (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.pathways.test.examples.CDesigner2BioPAX
  • fr.curie.BiNoM.pathways.wrappers.CellDesigner
  • fr.curie.BiNoM.pathways.converters.CellDesigner2BioPAX
  • fr.curie.BiNoM.pathways.converters.CellDesigner2Cytoscape
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerAssociateSource (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerAssociateSourceTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.CellDesignerColorSpecies
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerExport (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerExportTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerExportToFile (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerImport (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerImportFromFile (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerImportTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerSourceDB
  • fr.curie.BiNoM.pathways.CellDesignerToBioPAXConverter
  • fr.curie.BiNoM.pathways.CellDesignerToCytoscapeConverter
  • fr.curie.BiNoM.pathways.CellDesignerToCytoscapeConverter.Graph
  • fr.curie.BiNoM.cytoscape.analysis.ClusterNetworks (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.ClusterNetworksTask (implements cytoscape.task.Task)
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • fr.curie.BiNoM.cytoscape.lib.MLLabel
        • javax.swing.JScrollPane (implements javax.accessibility.Accessible, javax.swing.ScrollPaneConstants)
          • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXPropertyBrowserPanel (implements java.awt.event.MouseListener)
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Dialog
          • javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • fr.curie.BiNoM.cytoscape.biopax.BioPAXImportDialog (implements java.awt.event.ActionListener)
            • fr.curie.BiNoM.cytoscape.biopax.BioPAXSyncNetworksDialog
            • fr.curie.BiNoM.cytoscape.analysis.ClusterNetworksDialog
            • fr.curie.BiNoM.cytoscape.netwop.DoubleNetworkDifferenceDialog (implements java.awt.event.ActionListener)
            • fr.curie.BiNoM.cytoscape.analysis.EdgesFromOtherNetworkDialog
            • fr.curie.BiNoM.cytoscape.analysis.IndexPathAnalysisDialog
            • fr.curie.BiNoM.cytoscape.analysis.ModularViewDialog
            • fr.curie.BiNoM.cytoscape.netwop.NetworksUpdateConfirmDialog
            • fr.curie.BiNoM.cytoscape.netwop.NetworksUpdateDialog
            • fr.curie.BiNoM.cytoscape.utils.PasteNodesAndEdgesDialog (implements java.awt.event.ActionListener)
            • fr.curie.BiNoM.cytoscape.analysis.PathAnalysisDialog
            • fr.curie.BiNoM.cytoscape.utils.ShowClipboardContentsDialog
        • java.awt.Frame (implements java.awt.MenuContainer)
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXClassTreeFrame (implements java.awt.event.MouseListener, javax.swing.event.TreeSelectionListener)
            • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXDisplayIndexInfoDialog
            • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXGenerateIndexDialog
            • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXLoadIndexDialog
            • fr.curie.BiNoM.cytoscape.biopax.propedit.BioPAXPropertyBrowserFrame
            • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXSelectEntitiesDialog
            • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXStandardQueryDialog
            • fr.curie.BiNoM.cytoscape.biopax.query.BioPAXViewQueryLogDialog
  • fr.curie.BiNoM.cytoscape.analysis.ConnectedComponents (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.ConnectedComponentsTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.utils.CopySelectedNodesAndEdges (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.CycleDecomposition (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.CycleDecompositionTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.converters.Cytoscape2BioPAX
  • fr.curie.BiNoM.pathways.converters.Cytoscape2CellDesigner
  • cytoscape.plugin.CytoscapePlugin (implements java.beans.PropertyChangeListener)
    • fr.curie.BiNoM.cytoscape.plugin.BiNoMPlugin
  • fr.curie.BiNoM.pathways.CytoscapeToBioPAXConverter
  • fr.curie.BiNoM.pathways.CytoscapeToCellDesignerConverter
  • org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • fr.curie.BiNoM.pathways.utils.GraphXGMMLParser
  • fr.curie.BiNoM.cytoscape.netwop.DoubleNetworkDifference (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.EdgesFromOtherNetwork (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.EdgesFromOtherNetworkTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.analysis.structure.Element
    • fr.curie.BiNoM.pathways.analysis.structure.Edge
    • fr.curie.BiNoM.pathways.analysis.structure.Node
  • fr.curie.BiNoM.cytoscape.analysis.ExtractReactionNetwork (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.ExtractReactionNetworkTask (implements cytoscape.task.Task)
  • javax.swing.filechooser.FileFilter
    • fr.curie.BiNoM.cytoscape.biopax.query.OWLExtensionFilter
    • fr.curie.BiNoM.cytoscape.biopax.query.XGMMLExtensionFilter
  • fr.curie.BiNoM.pathways.analysis.structure.Graph
    • fr.curie.BiNoM.pathways.analysis.structure.BiographUtils
    • fr.curie.BiNoM.pathways.analysis.structure.BipartiteGraph
  • fr.curie.BiNoM.pathways.analysis.structure.GraphAlgorithms
  • fr.curie.BiNoM.cytoscape.lib.GraphDocumentFactory
  • fr.curie.BiNoM.cytoscape.lib.GraphicUtils
  • fr.curie.BiNoM.cytoscape.analysis.IndexPathAnalysisTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.utils.insertMassActionLaws
  • fr.curie.BiNoM.pathways.utils.LaplaceMatToSif
  • fr.curie.BiNoM.cytoscape.analysis.MaterialComponents (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.MaterialComponentsTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.analysis.ModularView (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.ModularViewTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.analysis.MonoMolecularReactionsAsEdges (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.MonoMolecularReactionsAsEdgesTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.lib.NetworkFactory
  • fr.curie.BiNoM.cytoscape.netwop.NetworkOperation
    • fr.curie.BiNoM.cytoscape.netwop.NetworkDifference
    • fr.curie.BiNoM.cytoscape.netwop.NetworkIntersection
    • fr.curie.BiNoM.cytoscape.netwop.NetworkUnion
  • fr.curie.BiNoM.cytoscape.netwop.NetworkOperation.Estimator
  • fr.curie.BiNoM.cytoscape.netwop.NetworksUpdate (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.netwop.NetworksUpdateTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.lib.NetworkUtils
  • fr.curie.BiNoM.cytoscape.utils.NodesAndEdgesClipboard
  • fr.curie.BiNoM.pathways.parseCellDesigner
  • fr.curie.BiNoM.cytoscape.utils.PasteNodesAndEdges (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.PathAnalysis (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.PathAnalysisTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.utils.PowerfulTokenizer (implements java.util.Enumeration<E>)
  • fr.curie.BiNoM.pathways.utils.prepareCellDesignerFile
  • fr.curie.BiNoM.pathways.test.ProduceClickableMap
  • fr.curie.BiNoM.cytoscape.analysis.PruneGraph (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.PruneGraphTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.wrappers.SBML
  • fr.curie.BiNoM.cytoscape.sbml.SBMLExport (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.sbml.SBMLExportTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.cytoscape.sbml.SBMLExportToFile (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.utils.SelectEdgesBetweenSelectedNodes (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.utils.ShowClipboardContents (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.pathways.utils.SimpleTable
  • fr.curie.BiNoM.pathways.analysis.structure.Skeleton
  • com.hp.hpl.jena.rdf.listeners.StatementListener (implements com.hp.hpl.jena.rdf.model.ModelChangedListener)
    • com.ibm.adtech.jastor.ThingImpl (implements com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.biochemicalReactionImpl (implements fr.curie.BiNoM.pathways.biopax.biochemicalReaction)
      • fr.curie.BiNoM.pathways.biopax.bioSourceImpl (implements fr.curie.BiNoM.pathways.biopax.bioSource)
      • fr.curie.BiNoM.pathways.biopax.catalysisImpl (implements fr.curie.BiNoM.pathways.biopax.catalysis)
      • fr.curie.BiNoM.pathways.biopax.chemicalStructureImpl (implements fr.curie.BiNoM.pathways.biopax.chemicalStructure)
      • fr.curie.BiNoM.pathways.biopax.complexAssemblyImpl (implements fr.curie.BiNoM.pathways.biopax.complexAssembly)
      • fr.curie.BiNoM.pathways.biopax.complexImpl (implements fr.curie.BiNoM.pathways.biopax.complex)
      • fr.curie.BiNoM.pathways.biopax.confidenceImpl (implements fr.curie.BiNoM.pathways.biopax.confidence)
      • fr.curie.BiNoM.pathways.biopax.controlImpl (implements fr.curie.BiNoM.pathways.biopax.control)
      • fr.curie.BiNoM.pathways.biopax.conversionImpl (implements fr.curie.BiNoM.pathways.biopax.conversion)
      • fr.curie.BiNoM.pathways.biopax.dataSourceImpl (implements fr.curie.BiNoM.pathways.biopax.dataSource)
      • fr.curie.BiNoM.pathways.biopax.deltaGprimeOImpl (implements fr.curie.BiNoM.pathways.biopax.deltaGprimeO)
      • fr.curie.BiNoM.pathways.biopax.dnaImpl (implements fr.curie.BiNoM.pathways.biopax.dna)
      • fr.curie.BiNoM.pathways.biopax.entityImpl (implements fr.curie.BiNoM.pathways.biopax.entity)
      • fr.curie.BiNoM.pathways.biopax.evidenceImpl (implements fr.curie.BiNoM.pathways.biopax.evidence)
      • fr.curie.BiNoM.pathways.biopax.experimentalFormImpl (implements fr.curie.BiNoM.pathways.biopax.experimentalForm)
      • fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClassImpl (implements fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass)
      • fr.curie.BiNoM.pathways.biopax.interactionImpl (implements fr.curie.BiNoM.pathways.biopax.interaction)
      • fr.curie.BiNoM.pathways.biopax.kPrimeImpl (implements fr.curie.BiNoM.pathways.biopax.kPrime)
      • fr.curie.BiNoM.pathways.biopax.modulationImpl (implements fr.curie.BiNoM.pathways.biopax.modulation)
      • fr.curie.BiNoM.pathways.biopax.openControlledVocabularyImpl (implements fr.curie.BiNoM.pathways.biopax.openControlledVocabulary)
      • fr.curie.BiNoM.pathways.biopax.pathwayImpl (implements fr.curie.BiNoM.pathways.biopax.pathway)
      • fr.curie.BiNoM.pathways.biopax.pathwayStepImpl (implements fr.curie.BiNoM.pathways.biopax.pathwayStep)
      • fr.curie.BiNoM.pathways.biopax.physicalEntityImpl (implements fr.curie.BiNoM.pathways.biopax.physicalEntity)
      • fr.curie.BiNoM.pathways.biopax.physicalEntityParticipantImpl (implements fr.curie.BiNoM.pathways.biopax.physicalEntityParticipant)
      • fr.curie.BiNoM.pathways.biopax.physicalInteractionImpl (implements fr.curie.BiNoM.pathways.biopax.physicalInteraction)
      • fr.curie.BiNoM.pathways.biopax.proteinImpl (implements fr.curie.BiNoM.pathways.biopax.protein)
      • fr.curie.BiNoM.pathways.biopax.publicationXrefImpl (implements fr.curie.BiNoM.pathways.biopax.publicationXref)
      • fr.curie.BiNoM.pathways.biopax.relationshipXrefImpl (implements fr.curie.BiNoM.pathways.biopax.relationshipXref)
      • fr.curie.BiNoM.pathways.biopax.rnaImpl (implements fr.curie.BiNoM.pathways.biopax.rna)
      • fr.curie.BiNoM.pathways.biopax.sequenceFeatureImpl (implements fr.curie.BiNoM.pathways.biopax.sequenceFeature)
      • fr.curie.BiNoM.pathways.biopax.sequenceIntervalImpl (implements fr.curie.BiNoM.pathways.biopax.sequenceInterval)
      • fr.curie.BiNoM.pathways.biopax.sequenceLocationImpl (implements fr.curie.BiNoM.pathways.biopax.sequenceLocation)
      • fr.curie.BiNoM.pathways.biopax.sequenceParticipantImpl (implements fr.curie.BiNoM.pathways.biopax.sequenceParticipant)
      • fr.curie.BiNoM.pathways.biopax.sequenceSiteImpl (implements fr.curie.BiNoM.pathways.biopax.sequenceSite)
      • fr.curie.BiNoM.pathways.biopax.smallMoleculeImpl (implements fr.curie.BiNoM.pathways.biopax.smallMolecule)
      • fr.curie.BiNoM.pathways.biopax.transportImpl (implements fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReactionImpl (implements fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction)
      • fr.curie.BiNoM.pathways.biopax.unificationXrefImpl (implements fr.curie.BiNoM.pathways.biopax.unificationXref)
      • fr.curie.BiNoM.pathways.biopax.utilityClassImpl (implements fr.curie.BiNoM.pathways.biopax.utilityClass)
      • fr.curie.BiNoM.pathways.biopax.xrefImpl (implements fr.curie.BiNoM.pathways.biopax.xref)
  • fr.curie.BiNoM.cytoscape.analysis.StronglyConnectedComponents (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.cytoscape.analysis.StronglyConnectedComponentsTask (implements cytoscape.task.Task)
  • fr.curie.BiNoM.pathways.analysis.structure.StructureAnalysisUtils
  • fr.curie.BiNoM.pathways.analysis.structure.StructureAnalysisUtils.Option
  • fr.curie.BiNoM.cytoscape.lib.TaskManager
  • fr.curie.BiNoM.pathways.test.test
  • fr.curie.BiNoM.pathways.test.test1
  • fr.curie.BiNoM.pathways.test.TestAutomaticStructureAnalysis
  • fr.curie.BiNoM.pathways.test.testBioBasePathway
  • fr.curie.BiNoM.pathways.test.TestBioPAX
  • fr.curie.BiNoM.pathways.test.testBioPAX1
  • fr.curie.BiNoM.pathways.test.testBioPAXExtract
  • fr.curie.BiNoM.pathways.test.testBioPAXMerge
  • fr.curie.BiNoM.pathways.test.testBioPAXQueryEngine
  • fr.curie.BiNoM.pathways.test.testCellDesigner
  • fr.curie.BiNoM.pathways.test.testEwingNetwork
  • fr.curie.BiNoM.pathways.test.testExtractBioPAX
  • fr.curie.BiNoM.pathways.test.testGraphMappingService
  • fr.curie.BiNoM.pathways.test.testJastor
  • fr.curie.BiNoM.pathways.test.testJavolution
  • fr.curie.BiNoM.pathways.test.TestModuleDecomposition
  • fr.curie.BiNoM.pathways.test.testNamingService
  • fr.curie.BiNoM.cytoscape.netwop.TestNetworkOP (implements java.awt.event.ActionListener)
  • fr.curie.BiNoM.pathways.test.testRBpathway
  • fr.curie.BiNoM.pathways.test.testSAX
  • fr.curie.BiNoM.pathways.test.testStructureAnalysis
  • fr.curie.BiNoM.pathways.test.testTranspath
  • com.ibm.adtech.jastor.ThingFactory
    • fr.curie.BiNoM.pathways.biopax.biopax_DASH_level2_DOT_owlFactory
  • fr.curie.BiNoM.pathways.wrappers.Transpath
  • fr.curie.BiNoM.pathways.converters.Transpath2BioPAX
  • fr.curie.BiNoM.cytoscape.lib.Utils
  • fr.curie.BiNoM.pathways.utils.Utils
  • fr.curie.BiNoM.cytoscape.lib.VisualStyleDefinition
    • fr.curie.BiNoM.cytoscape.biopax.BioPAXVisualStyleDefinition
    • fr.curie.BiNoM.cytoscape.celldesigner.CellDesignerVisualStyleDefinition
  • fr.curie.BiNoM.cytoscape.lib.VisualStyleDefinition.ImageDefinition
  • fr.curie.BiNoM.cytoscape.lib.VisualStyleDefinition.ObjectMapping
  • fr.curie.BiNoM.cytoscape.lib.VisualStyleFactory
  • fr.curie.BiNoM.pathways.test.workMatlabOvidiu
  • fr.curie.BiNoM.pathways.wrappers.XGMML
  • fr.curie.BiNoM.pathways.utils.XGMMLExport

Interface Hierarchy

• com.ibm.adtech.jastor.Thing
  • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion)
    • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
  • fr.curie.BiNoM.pathways.biopax.bioSource (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass)
  • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control)
  • fr.curie.BiNoM.pathways.biopax.chemicalStructure (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.complex (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity)
  • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion)
  • fr.curie.BiNoM.pathways.biopax.confidence (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.control (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction)
    • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
  • fr.curie.BiNoM.pathways.biopax.conversion (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction)
    • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
  • fr.curie.BiNoM.pathways.biopax.dataSource (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass)
  • fr.curie.BiNoM.pathways.biopax.deltaGprimeO (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.dna (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity)
  • fr.curie.BiNoM.pathways.biopax.entity
    • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.complex (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.control (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.conversion (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.dna (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.interaction (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.control (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.conversion (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
        • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.physicalInteraction (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
        • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.control (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.conversion (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
            • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
          • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
            • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
        • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.pathway (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.physicalEntity (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.complex (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.dna (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.protein (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.rna (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.smallMolecule (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.physicalInteraction (also extends fr.curie.BiNoM.pathways.biopax.interaction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.control (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.conversion (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
        • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.protein (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.rna (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.smallMolecule (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
  • fr.curie.BiNoM.pathways.biopax.evidence (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.experimentalForm (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
    • fr.curie.BiNoM.pathways.biopax.bioSource (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.dataSource (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.openControlledVocabulary (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
    • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
    • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
    • fr.curie.BiNoM.pathways.biopax.xref (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends com.ibm.adtech.jastor.Thing)
  • fr.curie.BiNoM.pathways.biopax.interaction (also extends fr.curie.BiNoM.pathways.biopax.entity)
    • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.control (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.conversion (also extends fr.curie.BiNoM.pathways.biopax.physicalInteraction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.physicalInteraction (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.control (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.conversion (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
        • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
          • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
  • fr.curie.BiNoM.pathways.biopax.kPrime (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control)
  • fr.curie.BiNoM.pathways.biopax.openControlledVocabulary (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass)
  • fr.curie.BiNoM.pathways.biopax.pathway (also extends fr.curie.BiNoM.pathways.biopax.entity)
  • fr.curie.BiNoM.pathways.biopax.pathwayStep (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.physicalEntity (also extends fr.curie.BiNoM.pathways.biopax.entity)
    • fr.curie.BiNoM.pathways.biopax.complex (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.dna (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.protein (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.rna (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.smallMolecule (also extends com.ibm.adtech.jastor.Thing)
  • fr.curie.BiNoM.pathways.biopax.physicalEntityParticipant (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
    • fr.curie.BiNoM.pathways.biopax.sequenceParticipant (also extends com.ibm.adtech.jastor.Thing)
  • fr.curie.BiNoM.pathways.biopax.physicalInteraction (also extends fr.curie.BiNoM.pathways.biopax.interaction)
    • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.catalysis (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.control (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.catalysis (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.modulation (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.conversion (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.biochemicalReaction (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
      • fr.curie.BiNoM.pathways.biopax.complexAssembly (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transport (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
    • fr.curie.BiNoM.pathways.biopax.modulation (also extends fr.curie.BiNoM.pathways.biopax.control, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.transport)
  • fr.curie.BiNoM.pathways.biopax.protein (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity)
  • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends fr.curie.BiNoM.pathways.biopax.xref)
  • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends fr.curie.BiNoM.pathways.biopax.xref)
  • fr.curie.BiNoM.pathways.biopax.rna (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity)
  • fr.curie.BiNoM.pathways.biopax.sequenceFeature (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
  • fr.curie.BiNoM.pathways.biopax.sequenceInterval (also extends fr.curie.BiNoM.pathways.biopax.sequenceLocation)
  • fr.curie.BiNoM.pathways.biopax.sequenceLocation (also extends fr.curie.BiNoM.pathways.biopax.utilityClass)
    • fr.curie.BiNoM.pathways.biopax.sequenceInterval (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.sequenceSite (also extends com.ibm.adtech.jastor.Thing)
  • fr.curie.BiNoM.pathways.biopax.sequenceParticipant (also extends fr.curie.BiNoM.pathways.biopax.physicalEntityParticipant)
  • fr.curie.BiNoM.pathways.biopax.sequenceSite (also extends fr.curie.BiNoM.pathways.biopax.sequenceLocation)
  • fr.curie.BiNoM.pathways.biopax.smallMolecule (also extends fr.curie.BiNoM.pathways.biopax.physicalEntity)
  • fr.curie.BiNoM.pathways.biopax.transport (also extends fr.curie.BiNoM.pathways.biopax.conversion)
    • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, com.ibm.adtech.jastor.Thing)
  • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReaction (also extends fr.curie.BiNoM.pathways.biopax.biochemicalReaction, fr.curie.BiNoM.pathways.biopax.transport)
  • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends fr.curie.BiNoM.pathways.biopax.xref)
  • fr.curie.BiNoM.pathways.biopax.utilityClass
    • fr.curie.BiNoM.pathways.biopax.bioSource (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.chemicalStructure (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.confidence (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.dataSource (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.deltaGprimeO (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.evidence (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.experimentalForm (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.bioSource (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.dataSource (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.openControlledVocabulary (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
      • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
      • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
      • fr.curie.BiNoM.pathways.biopax.xref (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends com.ibm.adtech.jastor.Thing)
        • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.kPrime (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.openControlledVocabulary (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.pathwayStep (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.physicalEntityParticipant (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.sequenceParticipant (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
    • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
    • fr.curie.BiNoM.pathways.biopax.sequenceFeature (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.sequenceInterval (also extends fr.curie.BiNoM.pathways.biopax.sequenceLocation, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.sequenceLocation (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.sequenceInterval (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.sequenceSite (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.sequenceParticipant (also extends fr.curie.BiNoM.pathways.biopax.physicalEntityParticipant, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.sequenceSite (also extends fr.curie.BiNoM.pathways.biopax.sequenceLocation, com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends com.ibm.adtech.jastor.Thing, fr.curie.BiNoM.pathways.biopax.xref)
    • fr.curie.BiNoM.pathways.biopax.xref (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass, com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends com.ibm.adtech.jastor.Thing)
      • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends com.ibm.adtech.jastor.Thing)
  • fr.curie.BiNoM.pathways.biopax.xref (also extends fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClass)
    • fr.curie.BiNoM.pathways.biopax.publicationXref (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.relationshipXref (also extends com.ibm.adtech.jastor.Thing)
    • fr.curie.BiNoM.pathways.biopax.unificationXref (also extends com.ibm.adtech.jastor.Thing)
• com.ibm.adtech.jastor.ThingListener
  • fr.curie.BiNoM.pathways.biopax.biochemicalReactionListener
  • fr.curie.BiNoM.pathways.biopax.bioSourceListener
  • fr.curie.BiNoM.pathways.biopax.catalysisListener
  • fr.curie.BiNoM.pathways.biopax.chemicalStructureListener
  • fr.curie.BiNoM.pathways.biopax.complexAssemblyListener
  • fr.curie.BiNoM.pathways.biopax.complexListener
  • fr.curie.BiNoM.pathways.biopax.confidenceListener
  • fr.curie.BiNoM.pathways.biopax.controlListener
  • fr.curie.BiNoM.pathways.biopax.conversionListener
  • fr.curie.BiNoM.pathways.biopax.dataSourceListener
  • fr.curie.BiNoM.pathways.biopax.deltaGprimeOListener
  • fr.curie.BiNoM.pathways.biopax.dnaListener
  • fr.curie.BiNoM.pathways.biopax.entityListener
  • fr.curie.BiNoM.pathways.biopax.evidenceListener
  • fr.curie.BiNoM.pathways.biopax.experimentalFormListener
  • fr.curie.BiNoM.pathways.biopax.externalReferenceUtilityClassListener
  • fr.curie.BiNoM.pathways.biopax.interactionListener
  • fr.curie.BiNoM.pathways.biopax.kPrimeListener
  • fr.curie.BiNoM.pathways.biopax.modulationListener
  • fr.curie.BiNoM.pathways.biopax.openControlledVocabularyListener
  • fr.curie.BiNoM.pathways.biopax.pathwayListener
  • fr.curie.BiNoM.pathways.biopax.pathwayStepListener
  • fr.curie.BiNoM.pathways.biopax.physicalEntityListener
  • fr.curie.BiNoM.pathways.biopax.physicalEntityParticipantListener
  • fr.curie.BiNoM.pathways.biopax.physicalInteractionListener
  • fr.curie.BiNoM.pathways.biopax.proteinListener
  • fr.curie.BiNoM.pathways.biopax.publicationXrefListener
  • fr.curie.BiNoM.pathways.biopax.relationshipXrefListener
  • fr.curie.BiNoM.pathways.biopax.rnaListener
  • fr.curie.BiNoM.pathways.biopax.sequenceFeatureListener
  • fr.curie.BiNoM.pathways.biopax.sequenceIntervalListener
  • fr.curie.BiNoM.pathways.biopax.sequenceLocationListener
  • fr.curie.BiNoM.pathways.biopax.sequenceParticipantListener
  • fr.curie.BiNoM.pathways.biopax.sequenceSiteListener
  • fr.curie.BiNoM.pathways.biopax.smallMoleculeListener
  • fr.curie.BiNoM.pathways.biopax.transportListener
  • fr.curie.BiNoM.pathways.biopax.transportWithBiochemicalReactionListener
  • fr.curie.BiNoM.pathways.biopax.unificationXrefListener
  • fr.curie.BiNoM.pathways.biopax.utilityClassListener
  • fr.curie.BiNoM.pathways.biopax.xrefListener